Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_H08
(843 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 109 6e-23
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 109 6e-23
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 93 1e-17
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 89 1e-16
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 88 3e-16
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 85 3e-15
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 83 1e-14
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 81 3e-14
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 67 5e-10
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 65 2e-09
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 62 1e-08
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 54 6e-06
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 53 8e-06
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 47 7e-04
UniRef50_A2P9C8 Cluster: Putative uncharacterized protein; n=3; ... 38 0.32
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 36 0.96
UniRef50_Q82SS9 Cluster: SLT domain; n=2; Nitrosomonas|Rep: SLT ... 34 3.9
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 34 3.9
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 109 bits (263), Expect = 6e-23
Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Frame = +1
Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIHSXSFTWWKY*VPCAASGHR 291
R WH+RR TGG+R + K+R LGRPAANT++GP+RIH+ V +R
Sbjct: 5 RDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHTVR-------VRGGNKKYR 56
Query: 292 *LLLGIGMFNSQNPYH*CCV*---CI*Q*IGAYKDPWSR------NAIVVVDATPFRQWY 444
L L +G F+ + CC I A + R N IV++D+TP+RQWY
Sbjct: 57 ALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113
Query: 445 ESHYTLPLGRKKGAKLTXAXEAIINKKRSQRQQE 546
ESHY LPLGRKKGAKLT E I+NKKRS++ Q+
Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQK 147
Score = 99 bits (238), Expect = 7e-20
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTL
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTL 96
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 109 bits (263), Expect = 6e-23
Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Frame = +1
Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIHSXSFTWWKY*VPCAASGHR 291
R WH+RR TGG+R + K+R LGRPAANT++GP+RIH+ V +R
Sbjct: 5 RDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHTVR-------VRGGNKKYR 56
Query: 292 *LLLGIGMFNSQNPYH*CCV*---CI*Q*IGAYKDPWSR------NAIVVVDATPFRQWY 444
L L +G F+ + CC I A + R N IV++D+TP+RQWY
Sbjct: 57 ALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113
Query: 445 ESHYTLPLGRKKGAKLTXAXEAIINKKRSQRQQE 546
ESHY LPLGRKKGAKLT E I+NKKRS++ Q+
Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQK 147
Score = 99 bits (238), Expect = 7e-20
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTL
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTL 96
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 92.7 bits (220), Expect = 1e-17
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TL
Sbjct: 48 RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTL 97
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +1
Query: 397 RNAIVVVDATPFRQWYESHYTLPLGRKK 480
++AIV VDA PF+QWY +HY + +GRKK
Sbjct: 99 KSAIVQVDAAPFKQWYLTHYGVDIGRKK 126
Score = 36.7 bits (81), Expect = 0.73
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQR 228
R H+RRATGG++ A +RK+R LGR ANT+L +
Sbjct: 5 RDSMHKRRATGGKQKA-WRKKRKYELGRQPANTKLSSNK 42
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 89.0 bits (211), Expect = 1e-16
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTL
Sbjct: 47 RCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTL 96
Score = 49.2 bits (112), Expect = 1e-04
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 124 HQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIHSXSFTWWKY*VPCAASG--HR*L 297
H+RR TGG R +K+R LGRP++NT+LG + + V C R L
Sbjct: 9 HKRRLTGG-RYPVHKKKRKYELGRPSSNTKLGSKLVRK---------VRCRGGNLKFRAL 58
Query: 298 LLGIGMFN--SQNPYH*CCV*CI*Q*IGAYK----DPWSRNAIVVVDATPFRQWYESHYT 459
L G F+ SQN V + + + +NAIV VD TPF+ W+++HY
Sbjct: 59 RLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYG 118
Query: 460 LPLGR 474
L LG+
Sbjct: 119 LELGK 123
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/50 (82%), Positives = 44/50 (88%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTL
Sbjct: 47 RTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTL 96
Score = 63.7 bits (148), Expect = 6e-09
Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Frame = +1
Query: 397 RNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTXAXEA--IINKKRSQR 537
+N+IVV+DATPFRQWYE+HY LPLGRK+ K + ++ KKRS++
Sbjct: 98 KNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEK 146
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 124 HQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIH 234
H+RRATGG+R RK+R LGRPAANT+LG R+H
Sbjct: 9 HKRRATGGKR-KSLRKKRKFELGRPAANTKLGSGRVH 44
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 84.6 bits (200), Expect = 3e-15
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELVRT+TL
Sbjct: 145 RVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELVRTQTL 194
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +1
Query: 397 RNAIVVVDATPFRQWYESHYTLPLGRKK 480
++AIV VDA PF+QWY +HY + +GRKK
Sbjct: 196 KSAIVQVDAAPFKQWYLTHYGVDIGRKK 223
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 82.6 bits (195), Expect = 1e-14
Identities = 36/53 (67%), Positives = 44/53 (83%)
Frame = +2
Query: 233 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
+P R+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTL
Sbjct: 44 SPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTL 96
Score = 39.9 bits (89), Expect = 0.078
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 397 RNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTXAXE 507
+N IV VDA PF++WY HY + L KK K A E
Sbjct: 98 KNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAE 135
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +1
Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRI 231
R+ H+R+ TGG+ RK+ + LGR ANTRLG +R+
Sbjct: 5 RSRLHKRKITGGKTKIH-RKRMKAELGRLPANTRLGARRV 43
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 81.4 bits (192), Expect = 3e-14
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +1
Query: 397 RNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTXAXEAIINKKRSQRQQE 546
+N IV++D+TP+RQWYESHY LPLGRKKGAKLT E I+NKKRS++ Q+
Sbjct: 78 KNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQK 127
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +1
Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIHS 237
R WH+RR TGG+R + K+R LGRPAANT++GP+RIH+
Sbjct: 5 RDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 53.2 bits (122), Expect = 8e-06
Identities = 31/45 (68%), Positives = 32/45 (71%)
Frame = +2
Query: 257 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTL
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTL 76
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 67.3 bits (157), Expect = 5e-10
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TL
Sbjct: 56 RCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTL 105
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TL
Sbjct: 47 RCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTL 96
Score = 41.1 bits (92), Expect = 0.034
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +1
Query: 124 HQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIH 234
H+RRATGG++ + +K++ + +GR ANTRLG R+H
Sbjct: 9 HKRRATGGKKNSM-QKKKKNTMGRQPANTRLGAIRVH 44
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +2
Query: 233 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
TP R RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL
Sbjct: 44 TPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTL 96
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 346
R+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 47 RTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1
Query: 124 HQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIH 234
H+R ATG +R + +RK+R GR ANTR+GP+RIH
Sbjct: 9 HKRSATGAKR-SHYRKKRAFEKGRQPANTRIGPKRIH 44
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 53.2 bits (122), Expect = 8e-06
Identities = 28/50 (56%), Positives = 33/50 (66%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL
Sbjct: 47 RVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTL 96
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 46.8 bits (106), Expect = 7e-04
Identities = 19/52 (36%), Positives = 35/52 (67%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLGQ 397
R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L +
Sbjct: 41 RVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_A2P9C8 Cluster: Putative uncharacterized protein; n=3;
Vibrio cholerae|Rep: Putative uncharacterized protein -
Vibrio cholerae 1587
Length = 1428
Score = 37.9 bits (84), Expect = 0.32
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +2
Query: 131 AGPPVGNVAPNSASSGSLR*GVPLQTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGS 310
+G V +VAP ASSG+++ ++TP V++ S S GN YR R+D+ + G
Sbjct: 716 SGENVPSVAPEQASSGAVKRWPEVKTPARVIT-SAGNASIDGNPGYRPTRVDSNGETMGY 774
Query: 311 ECSTR 325
E R
Sbjct: 775 EMRDR 779
Score = 37.9 bits (84), Expect = 0.32
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +2
Query: 131 AGPPVGNVAPNSASSGSLR*GVPLQTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGS 310
+G V +VAP ASSG+++ ++TP V++ S S GN YR R+D+ + G
Sbjct: 1098 SGENVPSVAPEQASSGAVKRWPEVKTPARVIT-SAGNASIDGNPGYRPTRVDSNGETMGY 1156
Query: 311 ECSTR 325
E R
Sbjct: 1157 EMRDR 1161
Score = 34.7 bits (76), Expect = 2.9
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 131 AGPPVGNVAPNSASSGSLR*GVPLQTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGS 310
+G V +V P ASSG+ + ++TP V++ S S GN YR R+D+ + G
Sbjct: 506 SGENVPSVEPEHASSGAAKRWPEVKTPARVIT-SAGNASIDGNPGYRPTRVDSNGETMGY 564
Query: 311 ECSTR 325
E R
Sbjct: 565 EMRDR 569
Score = 34.7 bits (76), Expect = 2.9
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 131 AGPPVGNVAPNSASSGSLR*GVPLQTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGS 310
+G V +V P ASSG+ + ++TP V++ S S GN YR R+D+ + G
Sbjct: 888 SGENVPSVEPEHASSGAAKRWPEVKTPARVIT-SAGNASIDGNPGYRPTRVDSNGETMGY 946
Query: 311 ECSTR 325
E R
Sbjct: 947 EMRDR 951
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 36.3 bits (80), Expect = 0.96
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391
R+ GGN K RALRL+ S + T+KT+I V N+++ VR K L
Sbjct: 45 RTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLL 94
>UniRef50_Q82SS9 Cluster: SLT domain; n=2; Nitrosomonas|Rep: SLT
domain - Nitrosomonas europaea
Length = 301
Score = 34.3 bits (75), Expect = 3.9
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = -1
Query: 462 QRIMRLIPLPEWSCIYYNNCIS*PRVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKL 292
Q+++R +PLP+ + NC+S V+VRTN + Y I L VE PQ ++
Sbjct: 115 QKLLRFMPLPDKRKVQLPNCLS-RNVYVRTNITPNKYYVDQSISAL-VEKLAPQYEI 169
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 34.3 bits (75), Expect = 3.9
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +1
Query: 397 RNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--XAXEAIINKKRSQ 534
++AIV + PFRQW+E+ Y LG KKG +T E + KKRS+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSK 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,758,649
Number of Sequences: 1657284
Number of extensions: 10865618
Number of successful extensions: 25565
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 24861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25553
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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