Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H08
         (843 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    63   1e-11
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.2  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       25   2.9  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   8.8  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 62.9 bits (146), Expect = 1e-11
 Identities = 26/46 (56%), Positives = 38/46 (82%)
 Frame = +1

Query: 397 RNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTXAXEAIINKKRSQ 534
           +NAI+V+DA+PFRQWYESHY LPLG+K+  +L    E +++KKR++
Sbjct: 27  KNAIIVIDASPFRQWYESHYLLPLGKKR--ELKAGEEDVLSKKRTK 70



 Score = 46.8 bits (106), Expect = 8e-07
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +2

Query: 323 RKTRIIDVVYNASNNELVRTKTL 391
           RK RIIDVVYNASNNEL+RTKTL
Sbjct: 3   RKARIIDVVYNASNNELIRTKTL 25


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 231 PLRFVHVVEILSTVRCVWTP--VTSLGDRNVQLAK 329
           PLR VH   +LS V C+ +P  V+ L  R + L K
Sbjct: 860 PLRDVHGTVVLSCVNCIKSPKAVSVLNSRWIPLNK 894


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 135 GHRWATLRPIPQAAXVCVRASRCKHQARSSAYPLRFVHVVEILSTV 272
           G RW  L     +  + +   + +HQ + SA  L    V EI++++
Sbjct: 313 GMRWVELPYESSSLSMVLMLPKMRHQLQQSAQQLSVADVTEIITSL 358


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 324 RVEHSDPQEKLPVSRRSARYLVFPPRERXGVDTLRTEP 211
           +V+ S+P E+ PV  +S    +FP      ++T  T+P
Sbjct: 355 KVKSSEPVEQCPVKLKSIIETLFPTHPT--INTPETDP 390


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,860
Number of Sequences: 2352
Number of extensions: 12691
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)