BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H08 (843 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 109 9e-24 BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 109 9e-24 AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 109 9e-24 AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 109 9e-24 AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 81 4e-15 >X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 protein. Length = 208 Score = 109 bits (263), Expect = 9e-24 Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 9/154 (5%) Frame = +1 Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIHSXSFTWWKY*VPCAASGHR 291 R WH+RR TGG+R + K+R LGRPAANT++GP+RIH+ V +R Sbjct: 5 RDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHTVR-------VRGGNKKYR 56 Query: 292 *LLLGIGMFNSQNPYH*CCV*---CI*Q*IGAYKDPWSR------NAIVVVDATPFRQWY 444 L L +G F+ + CC I A + R N IV++D+TP+RQWY Sbjct: 57 ALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113 Query: 445 ESHYTLPLGRKKGAKLTXAXEAIINKKRSQRQQE 546 ESHY LPLGRKKGAKLT E I+NKKRS++ Q+ Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQK 147 Score = 99 bits (238), Expect = 1e-20 Identities = 46/50 (92%), Positives = 46/50 (92%) Frame = +2 Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391 R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTL Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTL 96 >BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 protein. Length = 208 Score = 109 bits (263), Expect = 9e-24 Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 9/154 (5%) Frame = +1 Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIHSXSFTWWKY*VPCAASGHR 291 R WH+RR TGG+R + K+R LGRPAANT++GP+RIH+ V +R Sbjct: 5 RDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHTVR-------VRGGNKKYR 56 Query: 292 *LLLGIGMFNSQNPYH*CCV*---CI*Q*IGAYKDPWSR------NAIVVVDATPFRQWY 444 L L +G F+ + CC I A + R N IV++D+TP+RQWY Sbjct: 57 ALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113 Query: 445 ESHYTLPLGRKKGAKLTXAXEAIINKKRSQRQQE 546 ESHY LPLGRKKGAKLT E I+NKKRS++ Q+ Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQK 147 Score = 99 bits (238), Expect = 1e-20 Identities = 46/50 (92%), Positives = 46/50 (92%) Frame = +2 Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391 R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTL Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTL 96 >AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 protein. Length = 208 Score = 109 bits (263), Expect = 9e-24 Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 9/154 (5%) Frame = +1 Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIHSXSFTWWKY*VPCAASGHR 291 R WH+RR TGG+R + K+R LGRPAANT++GP+RIH+ V +R Sbjct: 5 RDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHTVR-------VRGGNKKYR 56 Query: 292 *LLLGIGMFNSQNPYH*CCV*---CI*Q*IGAYKDPWSR------NAIVVVDATPFRQWY 444 L L +G F+ + CC I A + R N IV++D+TP+RQWY Sbjct: 57 ALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113 Query: 445 ESHYTLPLGRKKGAKLTXAXEAIINKKRSQRQQE 546 ESHY LPLGRKKGAKLT E I+NKKRS++ Q+ Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQK 147 Score = 99 bits (238), Expect = 1e-20 Identities = 46/50 (92%), Positives = 46/50 (92%) Frame = +2 Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391 R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTL Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTL 96 >AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 protein. Length = 208 Score = 109 bits (263), Expect = 9e-24 Identities = 69/154 (44%), Positives = 90/154 (58%), Gaps = 9/154 (5%) Frame = +1 Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIHSXSFTWWKY*VPCAASGHR 291 R WH+RR TGG+R + K+R LGRPAANT++GP+RIH+ V +R Sbjct: 5 RDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHTVR-------VRGGNKKYR 56 Query: 292 *LLLGIGMFNSQNPYH*CCV*---CI*Q*IGAYKDPWSR------NAIVVVDATPFRQWY 444 L L +G F+ + CC I A + R N IV++D+TP+RQWY Sbjct: 57 ALRLDVGNFSWGSE---CCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113 Query: 445 ESHYTLPLGRKKGAKLTXAXEAIINKKRSQRQQE 546 ESHY LPLGRKKGAKLT E I+NKKRS++ Q+ Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQK 147 Score = 99 bits (238), Expect = 1e-20 Identities = 46/50 (92%), Positives = 46/50 (92%) Frame = +2 Query: 242 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391 R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTL Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTL 96 >AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 protein. Length = 188 Score = 81.4 bits (192), Expect = 4e-15 Identities = 34/50 (68%), Positives = 43/50 (86%) Frame = +1 Query: 397 RNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTXAXEAIINKKRSQRQQE 546 +N IV++D+TP+RQWYESHY LPLGRKKGAKLT E I+NKKRS++ Q+ Sbjct: 78 KNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQK 127 Score = 55.6 bits (128), Expect = 2e-07 Identities = 24/42 (57%), Positives = 32/42 (76%) Frame = +1 Query: 112 RAXWHQRRATGGQRCAQFRKQRXSALGRPAANTRLGPQRIHS 237 R WH+RR TGG+R + K+R LGRPAANT++GP+RIH+ Sbjct: 5 RDNWHKRRKTGGKR-KPYHKKRKYELGRPAANTKIGPRRIHT 45 Score = 53.2 bits (122), Expect = 1e-06 Identities = 31/45 (68%), Positives = 32/45 (71%) Frame = +2 Query: 257 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 391 NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTL Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTL 76 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 87,636,973 Number of Sequences: 237096 Number of extensions: 1776669 Number of successful extensions: 3508 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3341 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3503 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10649685938 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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