Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H07
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0110 - 17357323-17357403,17357487-17357595,17357737-173579...   101   6e-22
11_06_0227 + 21475954-21476771,21477215-21479144,21479292-214794...    29   6.2  
11_06_0595 - 25368114-25370051                                         28   8.3  
11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845     28   8.3  
11_04_0166 + 14317129-14317962,14318042-14318809,14319008-143197...    28   8.3  
08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505     28   8.3  
04_01_0129 + 1408408-1409055,1409107-1410013,1410145-1410294,141...    28   8.3  

>03_04_0110 -
           17357323-17357403,17357487-17357595,17357737-17357906,
           17358503-17358649,17358767-17358925,17359410-17359469,
           17359659-17359705,17359786-17359888,17362640-17363080
          Length = 438

 Score =  101 bits (243), Expect = 6e-22
 Identities = 45/95 (47%), Positives = 67/95 (70%)
 Frame = +2

Query: 287 ALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVVNKLDPQ 466
           ALL   +  GFH+ +P +T ++ IQ       V+N+PCGT GGV+I F++IEVVN+L  +
Sbjct: 173 ALLETITPPGFHVKLPWITQFEPIQ-------VRNIPCGTKGGVMISFDKIEVVNRLHKE 225

Query: 467 SVLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTL 571
            V + + N+   YD+T I++K+HHE+NQFCSAH+L
Sbjct: 226 FVHETLLNYGVHYDKTWIYDKIHHEINQFCSAHSL 260



 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 39/66 (59%), Positives = 53/66 (80%)
 Frame = +3

Query: 576 EVYIDLFDQIDENLRTALQKDLHEMAPGLRVQAVRVTKPKIPESIRKNYELMEAEKSKLL 755
           +VYIDLFDQIDE ++ A+Q+D    APG+ + +VRVTKP IP+SIR+N+ELME E++K L
Sbjct: 262 QVYIDLFDQIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPDSIRRNFELMEEERTKAL 321

Query: 756 IAAQHQ 773
           IA + Q
Sbjct: 322 IAIEKQ 327


>11_06_0227 +
           21475954-21476771,21477215-21479144,21479292-21479426,
           21480287-21480392,21480560-21480576
          Length = 1001

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +2

Query: 470 VLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLXRGI 583
           VLD++RN  AE +   +F+K+ HE+++  S  +  R I
Sbjct: 498 VLDLIRNIIAEENFVKVFDKL-HEVHRLSSQRSTVRRI 534


>11_06_0595 - 25368114-25370051
          Length = 645

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 571 QGMGTTELIQFMVHFIENKSPV 506
           +G GT E+I+F V FIE+  P+
Sbjct: 329 KGYGTEEVIEFCVEFIEDLRPI 350


>11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845
          Length = 958

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 470 VLDMVRNFTAEYDRTLIFNKVHHELNQFCSAHTLXRGI 583
           VLD+++N TAE +   IF K+ HE+ +  S  T  R I
Sbjct: 507 VLDLIQNITAEGNFVKIFKKL-HEVCRLSSQRTNVRRI 543


>11_04_0166 +
           14317129-14317962,14318042-14318809,14319008-14319740,
           14353399-14353892,14353971-14354417,14354505-14355110,
           14355204-14355391,14355470-14355640,14355723-14355810
          Length = 1442

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 571 QGMGTTELIQFMVHFIENKSPV 506
           +G GT E+I+F V FIE+  P+
Sbjct: 616 KGYGTEEVIEFCVEFIEDLRPI 637


>08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505
          Length = 772

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 571 QGMGTTELIQFMVHFIENKSPV 506
           +G GT E+I+F V FIE+  P+
Sbjct: 715 KGYGTEEVIEFCVEFIEDLRPI 736


>04_01_0129 +
           1408408-1409055,1409107-1410013,1410145-1410294,
           1419174-1419634,1419683-1419999,1420114-1420477
          Length = 948

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 571 QGMGTTELIQFMVHFIENKSPV 506
           +G GT E+I+F V FIE+  P+
Sbjct: 677 KGYGTEEVIEFCVEFIEDLRPI 698


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,684,952
Number of Sequences: 37544
Number of extensions: 268515
Number of successful extensions: 471
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)