Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H07
         (855 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   1.7  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   3.9  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   5.1  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   9.0  
AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione S-tran...    23   9.0  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.0  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +2

Query: 344 SYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVV 448
           S++AI T LQ   +K VP G    V  YFE  E+V
Sbjct: 646 SWQAIATALQ---MKGVPAGLQRIVRSYFENRELV 677


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 526  IENKSPVIFSCEVAHHI*YALWVQLIDYLDSFKINQH 416
            +E+ + V+F CEV H I     V+L+ Y  S  +N++
Sbjct: 957  VESVAHVLFQCEVFHEI----RVELLGYGTSDPVNEN 989


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 277 SGWSFITSYKSSWFSHDDTTSNIIQSHSDNFTN 375
           +G + I    SSW    D+T   +QS +DN T+
Sbjct: 722 TGMAGINGLSSSWHKVLDSTQLRLQSTTDNATD 754


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -2

Query: 383 LHQFVKLSEWLCMMLEVVSSCENQLDL*LVIKLHPDNKHQHXL 255
           +H F + +  L + L V+ + +++  L   +KL     H H L
Sbjct: 248 VHAFCEAAPMLLLQLYVLVTLQSEAQLAAALKLKTLGHHHHHL 290


>AY070254-1|AAL59653.1|  225|Anopheles gambiae glutathione
           S-transferase E4 protein.
          Length = 225

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 590 INVYLVXRYGHYRIDSVH 537
           INVYLV +YG    DS++
Sbjct: 71  INVYLVSKYGKPEGDSLY 88


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 638  ILLQCCP*ILVDLIKQINVYLVXRYGHYRID 546
            +L+  CP     L+ Q  ++ + +YG YR D
Sbjct: 1198 VLIGICPYPAECLVSQTLIFDLEKYGDYRQD 1228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,601
Number of Sequences: 2352
Number of extensions: 11012
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)