Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H07
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457741-16|CAM36358.1|  312|Caenorhabditis elegans Hypothetical...   145   4e-35
Z73427-6|CAA97798.2|  410|Caenorhabditis elegans Hypothetical pr...    30   2.4  

>CU457741-16|CAM36358.1|  312|Caenorhabditis elegans Hypothetical
           protein C42C1.15 protein.
          Length = 312

 Score =  145 bits (351), Expect = 4e-35
 Identities = 70/127 (55%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
 Frame = +2

Query: 194 LAIVXLAVGVTVXF-SLHKXXXXXXXXXXXXXALLPVTSQAGFHMMIPLLTSYKAIQTTL 370
           LA+   A+ + +   +LHK             ALL   +  G+HM IP LT+ K++Q TL
Sbjct: 5   LALGLFALWIAIFSQALHKIEEGHVGVYYRGGALLKAVTNPGYHMHIPFLTTVKSVQVTL 64

Query: 371 QTDEVKNVPCGTSGGVLIYFERIEVVNKLDPQSVLDMVRNFTAEYDRTLIFNKVHHELNQ 550
           QTDE  NVPCGTSGGVLIYF+RIEVVN L   SV  +V+N+T +YDR LIFNKVHHE+NQ
Sbjct: 65  QTDEATNVPCGTSGGVLIYFDRIEVVNFLSQDSVYAIVKNYTVDYDRPLIFNKVHHEVNQ 124

Query: 551 FCSAHTL 571
           FCS HTL
Sbjct: 125 FCSVHTL 131



 Score =  102 bits (245), Expect = 3e-22
 Identities = 49/66 (74%), Positives = 58/66 (87%)
 Frame = +3

Query: 576 EVYIDLFDQIDENLRTALQKDLHEMAPGLRVQAVRVTKPKIPESIRKNYELMEAEKSKLL 755
           EVYIDLFD+IDE ++ ALQ+DL +MAPGL VQAVRVTKPKIPE+IR NYE MEAEK+KLL
Sbjct: 133 EVYIDLFDKIDEEIKNALQEDLVKMAPGLYVQAVRVTKPKIPEAIRLNYEKMEAEKTKLL 192

Query: 756 IAAQHQ 773
           +A + Q
Sbjct: 193 VAQETQ 198


>Z73427-6|CAA97798.2|  410|Caenorhabditis elegans Hypothetical
           protein F58B3.6 protein.
          Length = 410

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 588 DLFDQIDENLRTALQKDLHEMAPGLRVQAVRVTKPKIPESIRKNYELMEAEKSKL 752
           D++DQ+ +NL  A  K+      GL    + +T    PE I +N E + A  S++
Sbjct: 53  DVYDQLVDNLDRAQDKNSTTRIDGLHRVNLALTAKPAPEFINRNKETIMAVCSRM 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,100,166
Number of Sequences: 27780
Number of extensions: 258930
Number of successful extensions: 439
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)