BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H05 (885 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 32 0.54 SB_2193| Best HMM Match : Glyco_transf_8 (HMM E-Value=0.00071) 30 2.9 SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0 SB_55898| Best HMM Match : Carb_anhydrase (HMM E-Value=3.6) 29 5.0 SB_298| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7 >SB_37351| Best HMM Match : DEAD (HMM E-Value=0) Length = 688 Score = 32.3 bits (70), Expect = 0.54 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = +3 Query: 246 GTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPG 401 G G WG + W +G G GGYNR +N D + G G R G G Sbjct: 609 GVGSWGNNNNRQSWGGRNQG--GSGGYNR--YNSDNSQ--GSFGGNRGFGGG 654 >SB_2193| Best HMM Match : Glyco_transf_8 (HMM E-Value=0.00071) Length = 482 Score = 29.9 bits (64), Expect = 2.9 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = -1 Query: 501 IPALPPICLFQVNSSPWRSHWPSLDDHRNWYCRLQVLILWCRKPVRS-VCRDHH*RTPCY 325 +P+L + SSP W D + W CR + CR ++ +CRD+ + C Sbjct: 280 MPSLNVYIKQMLESSPNEKKWLCRDYIKQWLCRDYIKQWLCRDYIKQWLCRDYLKQWLCR 339 Query: 324 NHLYQ 310 +++ Q Sbjct: 340 DYIKQ 344 >SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 955 Score = 29.1 bits (62), Expect = 5.0 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -3 Query: 280 PEDLPSPHFPVPSDKVVNIXEGVGLTLENWLVIGYFSA*P 161 P + SP F P V + +G L L +W+ GYF++ P Sbjct: 770 PRNYSSPEFAEPRSIVCRLQKG--LVLASWVFSGYFASRP 807 >SB_55898| Best HMM Match : Carb_anhydrase (HMM E-Value=3.6) Length = 531 Score = 29.1 bits (62), Expect = 5.0 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = -1 Query: 606 TDIXXSVTELLRDHSXRLTSECSYQDPTRPEADASIPALPPICLFQVNSSPW----RSHW 439 TD+ + + D + +T Y R E + +P L +F++ W + W Sbjct: 256 TDVAQTPKHSVTDVTQTVTQR--YSQTARDEEEV-VPILAARSMFKLGRMEWEVLTKEGW 312 Query: 438 PSLDDHRN 415 SLDDH+N Sbjct: 313 TSLDDHKN 320 >SB_298| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 287 Score = 28.3 bits (60), Expect = 8.7 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +3 Query: 246 GTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVL 392 G G +G G SG +GLFG G Y+ E R G AY L Sbjct: 114 GRGLFGGGAYSGEGLIRGRGLFGVGAYSGEALIRGRRLFGGGAYSGEAL 162 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,260,495 Number of Sequences: 59808 Number of extensions: 493749 Number of successful extensions: 1204 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1086 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1200 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2526446612 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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