BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H05 (885 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p pro... 32 0.92 AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-P... 32 0.92 BT016098-1|AAV36983.1| 1873|Drosophila melanogaster LD34837p pro... 31 1.6 AE014296-2299|ABC66150.1| 1557|Drosophila melanogaster CG17689-P... 31 1.6 AE014296-2298|AAF49803.3| 1873|Drosophila melanogaster CG17689-P... 31 1.6 BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p pro... 29 6.5 AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB... 29 6.5 AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA... 29 6.5 M25545-4|AAA28621.1| 361|Drosophila melanogaster protein ( D.me... 29 8.5 M25545-3|AAA28624.1| 365|Drosophila melanogaster protein ( D.me... 29 8.5 M25545-2|AAA28623.1| 360|Drosophila melanogaster protein ( D.me... 29 8.5 M25545-1|AAA28622.1| 364|Drosophila melanogaster protein ( D.me... 29 8.5 M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protei... 29 8.5 AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p pro... 29 8.5 AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF... 29 8.5 AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD... 29 8.5 AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC... 29 8.5 AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB... 29 8.5 AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE... 29 8.5 AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA... 29 8.5 >BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p protein. Length = 409 Score = 32.3 bits (70), Expect = 0.92 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 S G+G +G G SG + GGYN+ ++N + YG+ S+SY Sbjct: 49 STGSGGYGGGYGSGGYS---------GGYNQGYYNQPSRPVYNSEYGSSSSSSASSSSSY 99 Query: 420 GG 425 GG Sbjct: 100 GG 101 >AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-PA protein. Length = 409 Score = 32.3 bits (70), Expect = 0.92 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 S G+G +G G SG + GGYN+ ++N + YG+ S+SY Sbjct: 49 STGSGGYGGGYGSGGYS---------GGYNQGYYNQPSRPVYNSEYGSSSSSSASSSSSY 99 Query: 420 GG 425 GG Sbjct: 100 GG 101 >BT016098-1|AAV36983.1| 1873|Drosophila melanogaster LD34837p protein. Length = 1873 Score = 31.5 bits (68), Expect = 1.6 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -1 Query: 576 LRDHSXRLTSECSYQDPTRPEADASIPALPPICLFQVNSSP 454 L+ +S SY + + +A IPA PPIC+F + SP Sbjct: 73 LQQQQFASSSSKSYLETSLLQAIPQIPAQPPICIFDDDESP 113 >AE014296-2299|ABC66150.1| 1557|Drosophila melanogaster CG17689-PB, isoform B protein. Length = 1557 Score = 31.5 bits (68), Expect = 1.6 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -1 Query: 576 LRDHSXRLTSECSYQDPTRPEADASIPALPPICLFQVNSSP 454 L+ +S SY + + +A IPA PPIC+F + SP Sbjct: 73 LQQQQFASSSSKSYLETSLLQAIPQIPAQPPICIFDDDESP 113 >AE014296-2298|AAF49803.3| 1873|Drosophila melanogaster CG17689-PA, isoform A protein. Length = 1873 Score = 31.5 bits (68), Expect = 1.6 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -1 Query: 576 LRDHSXRLTSECSYQDPTRPEADASIPALPPICLFQVNSSP 454 L+ +S SY + + +A IPA PPIC+F + SP Sbjct: 73 LQQQQFASSSSKSYLETSLLQAIPQIPAQPPICIFDDDESP 113 >BT004875-1|AAO45231.1| 399|Drosophila melanogaster LD22761p protein. Length = 399 Score = 29.5 bits (63), Expect = 6.5 Identities = 24/96 (25%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Frame = +3 Query: 156 PPGYAEKYPITSQFSRVSPTPSXIFTTLSLGTGKWGEGRSS------GLWERATKGLFGK 317 PP Y + T ++ P G+G G G S G W +G Sbjct: 21 PPNYQQMPNKTGNYNEPPPNYGKQGGGYDSGSGHRGSGGSGNGGGGGGSWNDRGGNSYGN 80 Query: 318 GGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 425 GG +++ +N G +G G G GG GG Sbjct: 81 GGASKDSYNKGHGGYSGGGGG----GGGGGGGGSGG 112 >AE014298-2351|AAN09389.1| 399|Drosophila melanogaster CG3606-PB, isoform B protein. Length = 399 Score = 29.5 bits (63), Expect = 6.5 Identities = 24/96 (25%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Frame = +3 Query: 156 PPGYAEKYPITSQFSRVSPTPSXIFTTLSLGTGKWGEGRSS------GLWERATKGLFGK 317 PP Y + T ++ P G+G G G S G W +G Sbjct: 21 PPNYQQMPNKTGNYNEPPPNYGKQGGGYDSGSGHRGSGGSGNGGGGGGSWNDRGGNSYGN 80 Query: 318 GGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 425 GG +++ +N G +G G G GG GG Sbjct: 81 GGASKDSYNKGHGGYSGGGGG----GGGGGGGGSGG 112 >AE014298-2350|AAF48578.2| 399|Drosophila melanogaster CG3606-PA, isoform A protein. Length = 399 Score = 29.5 bits (63), Expect = 6.5 Identities = 24/96 (25%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Frame = +3 Query: 156 PPGYAEKYPITSQFSRVSPTPSXIFTTLSLGTGKWGEGRSS------GLWERATKGLFGK 317 PP Y + T ++ P G+G G G S G W +G Sbjct: 21 PPNYQQMPNKTGNYNEPPPNYGKQGGGYDSGSGHRGSGGSGNGGGGGGSWNDRGGNSYGN 80 Query: 318 GGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 425 GG +++ +N G +G G G GG GG Sbjct: 81 GGASKDSYNKGHGGYSGGGGG----GGGGGGGGSGG 112 >M25545-4|AAA28621.1| 361|Drosophila melanogaster protein ( D.melanogaster Hrb98DElocus encoding heterogeneous nuclear ribonucleoproteinisoforms, exon 5. ). Length = 361 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 220 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 274 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 275 GNNNPWDNGNGGG 287 >M25545-3|AAA28624.1| 365|Drosophila melanogaster protein ( D.melanogaster Hrb98DElocus encoding heterogeneous nuclear ribonucleoproteinisoforms, exon 5. ). Length = 365 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 224 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 278 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 279 GNNNPWDNGNGGG 291 >M25545-2|AAA28623.1| 360|Drosophila melanogaster protein ( D.melanogaster Hrb98DElocus encoding heterogeneous nuclear ribonucleoproteinisoforms, exon 5. ). Length = 360 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 219 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 273 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 274 GNNNPWDNGNGGG 286 >M25545-1|AAA28622.1| 364|Drosophila melanogaster protein ( D.melanogaster Hrb98DElocus encoding heterogeneous nuclear ribonucleoproteinisoforms, exon 5. ). Length = 364 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 223 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 277 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 278 GNNNPWDNGNGGG 290 >M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protein protein. Length = 365 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 224 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 278 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 279 GNNNPWDNGNGGG 291 >AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p protein. Length = 361 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 220 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 274 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 275 GNNNPWDNGNGGG 287 >AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF, isoform F protein. Length = 361 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 220 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 274 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 275 GNNNPWDNGNGGG 287 >AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD, isoform D protein. Length = 361 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 220 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 274 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 275 GNNNPWDNGNGGG 287 >AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC, isoform C protein. Length = 365 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 224 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 278 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 279 GNNNPWDNGNGGG 291 >AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB, isoform B protein. Length = 365 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 224 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 278 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 279 GNNNPWDNGNGGG 291 >AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE, isoform E protein. Length = 360 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 219 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 273 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 274 GNNNPWDNGNGGG 286 >AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA, isoform A protein. Length = 364 Score = 29.1 bits (62), Expect = 8.5 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 240 SLGTGKWGEGRSSGLWERATKGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSY 419 ++G G +G G W G N ND+ G + G G GG + S+ Sbjct: 223 NMGGGNYGNQNGGGNWNNG-----GNNWGNNRGGNDNWGNNSFGGGGGGGGGYGGGNNSW 277 Query: 420 GGRLDWANENAKG 458 G W N N G Sbjct: 278 GNNNPWDNGNGGG 290 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 33,945,093 Number of Sequences: 53049 Number of extensions: 739464 Number of successful extensions: 2008 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1919 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2008 length of database: 24,988,368 effective HSP length: 84 effective length of database: 20,532,252 effective search space used: 4311772920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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