Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H05
         (885 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          25   1.2  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    24   1.6  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   2.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.8  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   6.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   8.6  

>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 163 VTQRSIRSPA-NFQGSVRHPRRYSRLCHLGQGNGGREGLRDFGRERPRDFLVK 318
           ++  S+RS + +FQ +     RY  L H  + +   +G R   R+R R++  K
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRSREYKKK 264


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 348 DRGKLTGQAYGTRVLGPGGDSTSYGG 425
           D+  +TG AYG   + PG  S  + G
Sbjct: 66  DKNGMTGDAYGGLNIRPGQPSRQHAG 91


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -1

Query: 585 TELLRDHSXRLTSECSYQDPTRPEADASIPALPPICLF 472
           TELL++    LT++C Y   TRP  +  I ++ PI ++
Sbjct: 11  TELLQE----LTNDCRYDKMTRPPGE--INSINPINVY 42


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 453 WRSHWPSLDDHRNWY 409
           W +H P+ D   NWY
Sbjct: 661 WLNHSPNYDQVTNWY 675


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 273 SSGLWERATKGLFGKGGYNREFFNDDRGKLTG 368
           +SG+W     GLF    Y     N  +G L G
Sbjct: 346 ASGIWGIIAIGLFADNPYPLNTTNGRKGLLKG 377


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 166  TQRSIRSPANFQGSVRHPRRYSRLCHLGQGNG 261
            T  S  S +  Q   R   RYSR+   G G+G
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPSQGGGSG 1798


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 162 GYAEKYPITSQFSRVSPTPSXIFTTLSLGTG 254
           GY    P  +Q  R S T + + TT + G+G
Sbjct: 209 GYGRHLPGHAQMGRPSYTTATMATTSTPGSG 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,048
Number of Sequences: 438
Number of extensions: 4353
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)