Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H04
         (896 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|R...    38   0.46 
UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family prot...    34   4.3  
UniRef50_A0CJY8 Cluster: Chromosome undetermined scaffold_2, who...    33   7.5  
UniRef50_Q6NJ90 Cluster: Putative membrane protein; n=1; Coryneb...    33   9.9  

>UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|Rep:
           Fibrohexamerin precursor - Bombyx mori (Silk moth)
          Length = 220

 Score = 37.5 bits (83), Expect = 0.46
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +1

Query: 292 EVDIPNSNLTVEYHDVKTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTI 456
           + +IP  N T   H++ TR  D  ++ EFY N +T K VL  +   L   S +T+
Sbjct: 62  QFEIPYFNATYVDHNLITRNHDQCRVSEFYDNVRTLKTVLTVDCPWLNFESNRTL 116


>UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family
           protein; n=1; Tetrahymena thermophila SB210|Rep: Ser/Thr
           protein phosphatase family protein - Tetrahymena
           thermophila SB210
          Length = 884

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
 Frame = +3

Query: 405 SISSRSAVLKIGFAENNFQYNRKAKEPIVRSDALEVDYGTLTFTAVFPSISDLQLSNAEV 584
           SI++   VLK  F  +   +   AK+PI+R    + ++    F  +   +SDL  +  EV
Sbjct: 355 SINNFKIVLKENFPNSPHLF---AKKPILRFKIEQSNFDVFNFQRIESKLSDLVANPGEV 411

Query: 585 FSYVHE--INPKFILGPLL--SFSLDSETQSQLGKLLNNIAVSLQEVFE 719
             +     INPK I  P L   F    + +S    + N     ++E++E
Sbjct: 412 LKFWKRIIINPKTIKNPKLEEDFIKTLKGKSDFDTIGNETVKDIKELYE 460


>UniRef50_A0CJY8 Cluster: Chromosome undetermined scaffold_2, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_2,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 719

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
 Frame = +1

Query: 340 KTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTI--FNTIGKPKSQL*EVT 501
           K R    IKIIE +  SK+EKL+LA EV+ +KL +   I  F+ I + K+ L  +T
Sbjct: 457 KDRQTLAIKIIEKFKLSKSEKLMLAHEVEIMKLLNHSCIVRFHEIIETKTHLNIIT 512


>UniRef50_Q6NJ90 Cluster: Putative membrane protein; n=1;
           Corynebacterium diphtheriae|Rep: Putative membrane
           protein - Corynebacterium diphtheriae
          Length = 678

 Score = 33.1 bits (72), Expect = 9.9
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 337 VKTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPKTIFNTIG 471
           VK   +D+   + +Y++SK +K ++  EV S  L  PK I    G
Sbjct: 281 VKVGAYDSAAHMYYYVDSKNKKDLMGIEVSSTSLGQPKKIATATG 325


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,260,665
Number of Sequences: 1657284
Number of extensions: 11667788
Number of successful extensions: 23818
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23818
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)