Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H04
         (896 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    27   0.26 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    27   0.26 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   4.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 183  GAFDVFWVHRPDPSALQKQQQKRXNPKLK 97
            G  +V  V +PDP+A+QK ++K+   K K
Sbjct: 1033 GTREVTVVPKPDPNAVQKIEEKKPEKKDK 1061


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 183  GAFDVFWVHRPDPSALQKQQQKRXNPKLK 97
            G  +V  V +PDP+A+QK ++K+   K K
Sbjct: 1033 GTREVTVVPKPDPNAVQKIEEKKPEKKDK 1061


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 506 QCVTSYNWLFGFPIVLKI 453
           +CV  +N LFGF ++L +
Sbjct: 203 ECVDLFNSLFGFLVLLLV 220


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -1

Query: 488 NWLFGFPIVL--KIVFGEANFKDCTSAANTSFS 396
           N LFGFPI++   I F    F  C    N+  +
Sbjct: 250 NMLFGFPIIIGCLIQFNTIVFSFCYCYYNSKMT 282


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/43 (18%), Positives = 20/43 (46%)
 Frame = -3

Query: 408 Y*FFSFAVNVKLNDFNSIEASGFNIMIFYG*ITIRYIYFCSNL 280
           Y  F +   +++  FN+ ++    + +F+    + + Y  S L
Sbjct: 502 YLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVHCYLASEL 544


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,391
Number of Sequences: 336
Number of extensions: 3074
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)