BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H04 (896 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043,641... 29 3.8 >06_01_0844 - 6411121-6411129,6411671-6411796,6411980-6412043, 6412568-6412695,6412855-6412971,6414936-6415475, 6415554-6417344,6418359-6421407,6421765-6421823, 6422738-6422791 Length = 1978 Score = 29.5 bits (63), Expect = 3.8 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = +3 Query: 612 KFILGPLLSFSLDSETQSQLGKLLNNIAVSLQEVFEAQEL 731 K + PL + LD +TQSQ G+LL A++L ++F+ + L Sbjct: 1740 KNAIAPLSMYLLDPQTQSQQGRLL--AALALGDLFQNEGL 1777 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,525,962 Number of Sequences: 37544 Number of extensions: 301267 Number of successful extensions: 582 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 575 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 582 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2530383840 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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