BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H04 (896 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11) 30 2.9 SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7 SB_54800| Best HMM Match : zf-A20 (HMM E-Value=6.6) 28 8.9 SB_43499| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9 >SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11) Length = 502 Score = 29.9 bits (64), Expect = 2.9 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = +1 Query: 316 LTVEYHDVKTRGFDTIKIIEFYINSKTEKLVLAAEVQSLKLASPK 450 +T + V ++ + EF+ SK EK++LA + +LKL PK Sbjct: 11 ITTNFLSVFSKTHEVEWSTEFFQRSKNEKVLLALQEDTLKLKCPK 55 >SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4529 Score = 28.7 bits (61), Expect = 6.7 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = +3 Query: 444 AENNF--QYNRKAKEP---IVRSDALEVDYGTLTFTAVFPSISDLQLSNAEVFSYVHEIN 608 AEN F +++ A P + S + E+D + FP++S+ ++S + VFS + +N Sbjct: 3864 AENGFSTEHSSAASSPDTQYIMSSSPEIDASSKPKNLSFPALSNREISESPVFSPLAPVN 3923 Query: 609 PK 614 K Sbjct: 3924 IK 3925 >SB_54800| Best HMM Match : zf-A20 (HMM E-Value=6.6) Length = 86 Score = 28.3 bits (60), Expect = 8.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +2 Query: 134 WSALGSGRXTQKTSKAPXPNFDLNCIREYFSRNSQC 241 W+A G+G KTSK P ++ ++ R+S C Sbjct: 42 WTAWGNGLRVAKTSKGQKPGCPVHVPAQHADRSSVC 77 >SB_43499| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 356 Score = 28.3 bits (60), Expect = 8.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +2 Query: 134 WSALGSGRXTQKTSKAPXPNFDLNCIREYFSRNSQC 241 W+A G+G KTSK P ++ ++ R+S C Sbjct: 312 WTAWGNGLRVAKTSKGQKPGCPVHVPAQHADRSSVC 347 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,621,094 Number of Sequences: 59808 Number of extensions: 352059 Number of successful extensions: 773 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 763 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 773 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2574115416 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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