Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G24
(911 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 91 4e-17
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 68 4e-10
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 68 4e-10
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 66 1e-09
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 66 2e-09
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 62 1e-08
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 59 2e-07
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 59 2e-07
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 58 3e-07
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 49 1e-04
UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing... 48 3e-04
UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n... 48 3e-04
UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n... 40 0.067
UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2; ... 40 0.12
UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to UBIQUITIN-... 39 0.20
UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiell... 38 0.36
UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2; Thermoprot... 36 1.9
UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146... 35 3.3
UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza sa... 34 5.8
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 91.1 bits (216), Expect = 4e-17
Identities = 49/116 (42%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +1
Query: 100 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 279
MQ+ ++G + H ++V+ + + Q+K + + ED LS G P
Sbjct: 1 MQVFVQGGALHAINVSEETTFNQLKSELVLSEGITVEDQVLSYGGVPLEDDTLVCEIVPE 60
Query: 280 XXXXT--VPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
+ V ++GGKVHGSLARAGKV+GQTPKVE TGRAKRR+QYNRRFV
Sbjct: 61 LATLSLAVRVVGGKVHGSLARAGKVRGQTPKVEAQEKKKKKTGRAKRRMQYNRRFV 116
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 67.7 bits (158), Expect = 4e-10
Identities = 47/128 (36%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Frame = +1
Query: 109 HIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXXXXX 288
H + Q H L V GQE + QIK + +L +D L L G P
Sbjct: 4 HAQSQELHTLKVTGQEMVAQIKAHVASLEG---KDQVLLLAGTPLEDEVTLGQCEVEALS 60
Query: 289 XTVP---LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVKRCADL 459
+LGGKVHGSL AGKV+GQTPKV+ G+AKR YN FVK L
Sbjct: 61 TLEVVGRMLGGKVHGSLDCAGKVRGQTPKVDKESKRRW--GQAKRGTYYNPCFVKVVPHL 118
Query: 460 RTSSRTQL 483
+ T +
Sbjct: 119 KKKKGTNV 126
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|Rep:
40S ribosomal protein S30 - Homo sapiens (Human)
Length = 59
Score = 67.7 bits (158), Expect = 4e-10
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +1
Query: 313 KVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
KVHGSLARAGKV+GQTPKV TGRAKRR+QYNRRFV
Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFV 43
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 66.1 bits (154), Expect = 1e-09
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +1
Query: 301 LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
LLGGKVHGSLARAGKV+ QTPKV+ GRA RR+QY RR+V
Sbjct: 68 LLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYV 114
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 65.7 bits (153), Expect = 2e-09
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = +1
Query: 313 KVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
KVHGSLARAGKV+GQTP V+ GRAKRRIQYNRRFV
Sbjct: 1 KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFV 43
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +1
Query: 310 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
GKVHGSLARAGKV+GQTPKV GRA +R+Q+NRRFV
Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFV 45
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 78
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +1
Query: 310 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
GKVHGSLARAGKVK TPKVE GRA +R++Y RRFV
Sbjct: 2 GKVHGSLARAGKVKSATPKVEKQEKKKEPKGRALKRLKYTRRFV 45
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 58.8 bits (136), Expect = 2e-07
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = +1
Query: 310 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
GKVHGSLARAGKVK QTPKVE GRA +R+ Y RRFV
Sbjct: 2 GKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFV 45
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=4;
Leishmania|Rep: 40S ribosomal protein S30, putative -
Leishmania major
Length = 66
Score = 58.0 bits (134), Expect = 3e-07
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +1
Query: 310 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVKR 447
GK+HGSLARAGKVK QTPKV GRA +R++Y RRF+ +
Sbjct: 2 GKIHGSLARAGKVKNQTPKVAKQEKPKQPRGRALKRLKYTRRFLSK 47
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +1
Query: 310 GKVHGSLARAGKVKGQTPKVE-XXXXXXXXTGRAKRRIQYNRRF 438
GK+HG+LA+AGKV+ QTPK+E GRA +RI +NRRF
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIEKQVRRHKIPKGRAYKRICFNRRF 45
>UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S30 containing protein - Tetrahymena
thermophila SB210
Length = 80
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +1
Query: 310 GKVHGSLARAGKVKGQTPKVE-XXXXXXXXTGRAKRRIQYNRRF 438
G++HG+LA+AGKV+ QTPKVE GR+ +RI YNRR+
Sbjct: 2 GRMHGTLAKAGKVRKQTPKVEKKDKPRKTPKGRSYKRILYNRRY 45
>UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB4B7C UniRef100
entry - Canis familiaris
Length = 104
Score = 48.0 bits (109), Expect = 3e-04
Identities = 37/104 (35%), Positives = 45/104 (43%)
Frame = +1
Query: 130 HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXXXXXXTVPLLG 309
H L V GQE + Q+K + +L + ED + L G P LG
Sbjct: 3 HTLKVTGQEMVAQMKAHVASLEGIAPEDQVVLLAGIPLEDE---------------ATLG 47
Query: 310 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
G A GKV+GQ PKV TGRAKR IQY+ FV
Sbjct: 48 --QCGVEAPHGKVRGQAPKVAKQEKQKKKTGRAKRWIQYHWHFV 89
>UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB013B UniRef100
entry - Canis familiaris
Length = 109
Score = 40.3 bits (90), Expect = 0.067
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 100 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCG 234
MQL + Q H L+V GQE++ QIK + +L ++ ED + L G
Sbjct: 1 MQLFVWTQELHTLEVTGQETVTQIKTYVASLESIAPEDQVMLLAG 45
>UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S30 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 39.5 bits (88), Expect = 0.12
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 310 GKVHGSLARAGKVKGQTPKVE--XXXXXXXXTGRAKRRIQYNRRFV 441
GKVHG L RAGKV+ QT K E +GRA R Y++R V
Sbjct: 2 GKVHGGLTRAGKVRNQTKKPEKVDTGKKKFPSGRAYLRYLYSKRMV 47
>UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to
UBIQUITIN-LIKE PROTEIN FUBI; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to UBIQUITIN-LIKE
PROTEIN FUBI - Canis familiaris
Length = 166
Score = 38.7 bits (86), Expect = 0.20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 64 LVRLGFDKXFTXMQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAP 240
L+ LG T +QL +R H L+V G E+ IK + +L ED + L G+P
Sbjct: 5 LLTLGVAHAVTDVQLLVRAWELHTLEVTGLEAFAHIKTHVASLEGHTTEDKVVLLAGSP 63
>UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiella
natans|Rep: Ribosomal protein S30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 55
Score = 37.9 bits (84), Expect = 0.36
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 310 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRR 417
GKVHGSL RAGKV+ QT + +GRA+ R
Sbjct: 2 GKVHGSLTRAGKVRNQTKFIAKSDKKVKNSGRARYR 37
>UniRef50_A0RV16 Cluster: Ribosomal protein S30E; n=2;
Thermoprotei|Rep: Ribosomal protein S30E - Cenarchaeum
symbiosum
Length = 60
Score = 35.5 bits (78), Expect = 1.9
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 319 HGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
HGSL +AGKV+ QTPK+E + R Y +R V
Sbjct: 4 HGSLTKAGKVRSQTPKIE-GRKKTGTNASVQNRSNYRKRLV 43
>UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146;
n=4; Euteleostomi|Rep: Uncharacterized protein
ENSP00000310146 - Homo sapiens (Human)
Length = 74
Score = 34.7 bits (76), Expect = 3.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 109 HIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAP 240
++R + H L+V G E++ Q K + +L + ED + L G+P
Sbjct: 4 YVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSP 47
>UniRef50_Q7XUY7 Cluster: OSJNBb0048E02.10 protein; n=3; Oryza
sativa|Rep: OSJNBb0048E02.10 protein - Oryza sativa
subsp. japonica (Rice)
Length = 423
Score = 33.9 bits (74), Expect = 5.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 117 RAIDTRPGRQWPGVHWSDQGTHSYSCCSW**RPYSIIMWS 236
+A+ RP PG+HW++Q YS CS P I MW+
Sbjct: 368 KAMSMRPDAH-PGIHWNNQWMRGYSDCSHWCLPGPIDMWN 406
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,206,942
Number of Sequences: 1657284
Number of extensions: 9548747
Number of successful extensions: 17140
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 16785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17135
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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