BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G24
(911 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X65923-1|CAA46716.1| 133|Homo sapiens fau protein. 103 7e-22
X65921-1|CAA46714.1| 133|Homo sapiens fau 1 protein. 103 7e-22
CR541974-1|CAG46772.1| 133|Homo sapiens FAU protein. 103 7e-22
BC033877-1|AAH33877.1| 133|Homo sapiens Finkel-Biskis-Reilly mu... 103 7e-22
AY398663-1|AAQ87877.1| 133|Homo sapiens Finkel-Biskis-Reilly mu... 103 7e-22
AK026639-1|BAB15515.1| 133|Homo sapiens protein ( Homo sapiens ... 103 7e-22
>X65923-1|CAA46716.1| 133|Homo sapiens fau protein.
Length = 133
Score = 103 bits (248), Expect = 7e-22
Identities = 55/117 (47%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Frame = +1
Query: 100 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 279
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 280 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
+LGGKVHGSLARAGKV+GQTPKV TGRAKRR+QYNRRFV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFV 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 443 NVVQTFGRRRGPNSNS 490
NVV TFG+++GPN+NS
Sbjct: 118 NVVPTFGKKKGPNANS 133
>X65921-1|CAA46714.1| 133|Homo sapiens fau 1 protein.
Length = 133
Score = 103 bits (248), Expect = 7e-22
Identities = 55/117 (47%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Frame = +1
Query: 100 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 279
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 280 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
+LGGKVHGSLARAGKV+GQTPKV TGRAKRR+QYNRRFV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFV 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 443 NVVQTFGRRRGPNSNS 490
NVV TFG+++GPN+NS
Sbjct: 118 NVVPTFGKKKGPNANS 133
>CR541974-1|CAG46772.1| 133|Homo sapiens FAU protein.
Length = 133
Score = 103 bits (248), Expect = 7e-22
Identities = 55/117 (47%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Frame = +1
Query: 100 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 279
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 280 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
+LGGKVHGSLARAGKV+GQTPKV TGRAKRR+QYNRRFV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFV 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 443 NVVQTFGRRRGPNSNS 490
NVV TFG+++GPN+NS
Sbjct: 118 NVVPTFGKKKGPNANS 133
>BC033877-1|AAH33877.1| 133|Homo sapiens Finkel-Biskis-Reilly
murine sarcoma virus (FBR-MuSV) ubiquitously expressed
protein.
Length = 133
Score = 103 bits (248), Expect = 7e-22
Identities = 55/117 (47%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Frame = +1
Query: 100 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 279
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 280 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
+LGGKVHGSLARAGKV+GQTPKV TGRAKRR+QYNRRFV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFV 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 443 NVVQTFGRRRGPNSNS 490
NVV TFG+++GPN+NS
Sbjct: 118 NVVPTFGKKKGPNANS 133
>AY398663-1|AAQ87877.1| 133|Homo sapiens Finkel-Biskis-Reilly
murine sarcoma virus (FBR-MuSV) ubiquitously expressed
(fo protein.
Length = 133
Score = 103 bits (248), Expect = 7e-22
Identities = 55/117 (47%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Frame = +1
Query: 100 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 279
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 280 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
+LGGKVHGSLARAGKV+GQTPKV TGRAKRR+QYNRRFV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFV 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 443 NVVQTFGRRRGPNSNS 490
NVV TFG+++GPN+NS
Sbjct: 118 NVVPTFGKKKGPNANS 133
>AK026639-1|BAB15515.1| 133|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22986 fis, clone KAT11742. ).
Length = 133
Score = 103 bits (248), Expect = 7e-22
Identities = 55/117 (47%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Frame = +1
Query: 100 MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 279
MQL +R Q H +V GQE++ QIK + +L + ED + L GAP
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 280 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441
+LGGKVHGSLARAGKV+GQTPKV TGRAKRR+QYNRRFV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFV 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 443 NVVQTFGRRRGPNSNS 490
NVV TFG+++GPN+NS
Sbjct: 118 NVVPTFGKKKGPNANS 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,491,520
Number of Sequences: 237096
Number of extensions: 1599556
Number of successful extensions: 6395
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6389
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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