BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G24 (911 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g56670.1 68418.m07074 40S ribosomal protein S30 (RPS30C) 62 4e-10 At4g29390.1 68417.m04198 40S ribosomal protein S30 (RPS30B) RIBO... 62 4e-10 At2g19750.1 68415.m02307 40S ribosomal protein S30 (RPS30A) 62 4e-10 At3g26200.1 68416.m03269 cytochrome P450 71B22, putative (CYP71B... 28 7.5 >At5g56670.1 68418.m07074 40S ribosomal protein S30 (RPS30C) Length = 62 Score = 62.5 bits (145), Expect = 4e-10 Identities = 29/44 (65%), Positives = 33/44 (75%) Frame = +1 Query: 310 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441 GKVHGSLARAGKV+GQTPKV GRA +R+Q+NRRFV Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFV 45 >At4g29390.1 68417.m04198 40S ribosomal protein S30 (RPS30B) RIBOSOMAL PROTEIN S30 - Arabidopsis thaliana,PID:e1358183 Length = 62 Score = 62.5 bits (145), Expect = 4e-10 Identities = 29/44 (65%), Positives = 33/44 (75%) Frame = +1 Query: 310 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441 GKVHGSLARAGKV+GQTPKV GRA +R+Q+NRRFV Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFV 45 >At2g19750.1 68415.m02307 40S ribosomal protein S30 (RPS30A) Length = 62 Score = 62.5 bits (145), Expect = 4e-10 Identities = 29/44 (65%), Positives = 33/44 (75%) Frame = +1 Query: 310 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFV 441 GKVHGSLARAGKV+GQTPKV GRA +R+Q+NRRFV Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFV 45 >At3g26200.1 68416.m03269 cytochrome P450 71B22, putative (CYP71B22) Identical to cytochrome P450 71B22 (SP:Q9LTM1)[Arabidopsis thaliana];contains Pfam profile: PF00067 cytochrome P450 Length = 500 Score = 28.3 bits (60), Expect = 7.5 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Frame = -3 Query: 219 SKVFITNCSKS--TNAFLDLTNGLLAIDVQDVCRLPSDMQLHXC 94 S+V + SKS T +DL L + VCRL H C Sbjct: 148 SEVLVNKLSKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHEC 191 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,657,471 Number of Sequences: 28952 Number of extensions: 219541 Number of successful extensions: 412 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 406 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 412 length of database: 12,070,560 effective HSP length: 81 effective length of database: 9,725,448 effective search space used: 2159049456 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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