Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G22
         (1034 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0193 + 18344984-18345946                                         31   1.5  
06_01_0638 + 4640218-4640808                                           31   2.0  
04_03_1017 + 21747044-21748051                                         30   2.6  

>03_04_0193 + 18344984-18345946
          Length = 320

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = +2

Query: 461 TPPAASGXFRACRAKPGYSASXPKGG*LRFIHQKSXGI-TQEKNHVEPKRASQKARKPVK 637
           T  +ASG      ++   S+S       R   QKS    T  +++   K AS  A  P +
Sbjct: 92  TASSASGFSSRSDSRSASSSSSSSSCVSRSTSQKSASSDTAGRSNQPSKAASSDALLPPR 151

Query: 638 KAXFAGRFFHRAPPPLNEPSQK 703
           +   +G  F+  P P   PSQ+
Sbjct: 152 RRPLSGSLFYAHPSPSPRPSQR 173


>06_01_0638 + 4640218-4640808
          Length = 196

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 20/60 (33%), Positives = 24/60 (40%)
 Frame = -1

Query: 548 TVITRPLEXRLNNPASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFG 369
           T  T P    L   + PGKP + P R+  F     R  RE+      P TR    R R G
Sbjct: 113 TQSTTPARKGLAVASPPGKPLSTPGRKRNFVAGDWRGGREKERGNNFPPTRARQRRPRLG 172


>04_03_1017 + 21747044-21748051
          Length = 335

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = -1

Query: 506 ASPG-KPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFGPEFSI*NAKKKKP 330
           ASP   PE+ PRR A          R    P  TP++    PRR   P++S  +  ++  
Sbjct: 74  ASPDYTPESPPRRAASPDYSPASPPRRAASPDYTPES---PPRRAASPDYSPESPPRRAA 130

Query: 329 FP-HQPSPP 306
            P + P+ P
Sbjct: 131 SPDYTPASP 139



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -1

Query: 506 ASPG-KPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFGPEFS 357
           ASP   PE+ PRR A         SR    P  TP++    PRR   P+++
Sbjct: 116 ASPDYSPESPPRRAASPDYTPASPSRRAASPDYTPES---PPRRAASPDYT 163



 Score = 28.7 bits (61), Expect = 8.0
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = -1

Query: 506 ASPG-KPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFGPEFSI*NAKKKKP 330
           ASP   P T PRR A          R    P  +P T    PRR   P+++  +  ++  
Sbjct: 189 ASPDYSPSTPPRRAASPDYSPSTPPRRAASPDYSPST---PPRRAASPDYTPMSPPRRAA 245

Query: 329 FPH--QPSPP 306
            P   Q +PP
Sbjct: 246 SPDYTQMTPP 255


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,517,393
Number of Sequences: 37544
Number of extensions: 529097
Number of successful extensions: 1270
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3047748156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)