Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G22
(1034 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL445068-2|CAI22520.1| 366|Homo sapiens protein ( Human DNA seq... 34 0.74
AL050350-5|CAI42513.1| 366|Homo sapiens protein ( Human DNA seq... 34 0.74
U50839-1|AAC35207.1| 1123|Homo sapiens g16 protein protein. 33 1.7
BC046643-1|AAH46643.1| 601|Homo sapiens RBM6 protein protein. 33 1.7
AF091264-1|AAD04160.1| 1123|Homo sapiens RNA binding motif prote... 33 1.7
AF069517-1|AAC21578.1| 1123|Homo sapiens RNA binding protein DEF... 33 1.7
AF042857-1|AAC05826.1| 1123|Homo sapiens lung cancer antigen NY-... 33 1.7
AB183864-1|BAD86792.1| 1271|Homo sapiens diacylglycerol kinase k... 31 9.1
>AL445068-2|CAI22520.1| 366|Homo sapiens protein ( Human DNA
sequence from clone RP1-71D21 on chromosome 6. ).
Length = 366
Score = 34.3 bits (75), Expect = 0.74
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -1
Query: 509 PASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPR---RRFGPEFSI 354
P +PG+P RRQ + V GR++ GG TP+ +PR RR GP + I
Sbjct: 59 PPAPGQPRGASRRQVTY-VRSGRRAPPGGGGSGTPEPGCCAPRGRPRRKGPRWHI 112
>AL050350-5|CAI42513.1| 366|Homo sapiens protein ( Human DNA
sequence from clone RP1-261K5 on chromosome 6q21-22.1
Contains the 3' end of the SLC22A16 gene for solute
carrier family ).
Length = 366
Score = 34.3 bits (75), Expect = 0.74
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -1
Query: 509 PASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPR---RRFGPEFSI 354
P +PG+P RRQ + V GR++ GG TP+ +PR RR GP + I
Sbjct: 59 PPAPGQPRGASRRQVTY-VRSGRRAPPGGGGSGTPEPGCCAPRGRPRRKGPRWHI 112
>U50839-1|AAC35207.1| 1123|Homo sapiens g16 protein protein.
Length = 1123
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/63 (38%), Positives = 29/63 (46%)
Frame = -1
Query: 548 TVITRPLEXRLNNPASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFG 369
T I PLE + N P P E PR++ E G++SR G Q R P RR G
Sbjct: 581 TSIPAPLEKQPNQPLRPADKEPEPRKR-----EEGQESRL--GHQKREAERYLPPSRREG 633
Query: 368 PEF 360
P F
Sbjct: 634 PTF 636
>BC046643-1|AAH46643.1| 601|Homo sapiens RBM6 protein protein.
Length = 601
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/63 (38%), Positives = 29/63 (46%)
Frame = -1
Query: 548 TVITRPLEXRLNNPASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFG 369
T I PLE + N P P E PR++ E G++SR G Q R P RR G
Sbjct: 59 TSIPAPLEKQPNQPLRPADKEPEPRKR-----EEGQESRL--GHQKREAERYLPPSRREG 111
Query: 368 PEF 360
P F
Sbjct: 112 PTF 114
>AF091264-1|AAD04160.1| 1123|Homo sapiens RNA binding motif protein
6 protein.
Length = 1123
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/63 (38%), Positives = 29/63 (46%)
Frame = -1
Query: 548 TVITRPLEXRLNNPASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFG 369
T I PLE + N P P E PR++ E G++SR G Q R P RR G
Sbjct: 581 TSIPAPLEKQPNQPLRPADKEPEPRKR-----EEGQESRL--GHQKREAERYLPPSRREG 633
Query: 368 PEF 360
P F
Sbjct: 634 PTF 636
>AF069517-1|AAC21578.1| 1123|Homo sapiens RNA binding protein DEF-3
protein.
Length = 1123
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/63 (38%), Positives = 29/63 (46%)
Frame = -1
Query: 548 TVITRPLEXRLNNPASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFG 369
T I PLE + N P P E PR++ E G++SR G Q R P RR G
Sbjct: 581 TSIPAPLEKQPNQPLRPADKEPEPRKR-----EEGQESRL--GHQKREAERYLPPSRREG 633
Query: 368 PEF 360
P F
Sbjct: 634 PTF 636
>AF042857-1|AAC05826.1| 1123|Homo sapiens lung cancer antigen
NY-LU-12 variant A protein.
Length = 1123
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/63 (38%), Positives = 29/63 (46%)
Frame = -1
Query: 548 TVITRPLEXRLNNPASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFG 369
T I PLE + N P P E PR++ E G++SR G Q R P RR G
Sbjct: 581 TSIPAPLEKQPNQPLRPADKEPEPRKR-----EEGQESRL--GHQKREAERYLPPSRREG 633
Query: 368 PEF 360
P F
Sbjct: 634 PTF 636
>AB183864-1|BAD86792.1| 1271|Homo sapiens diacylglycerol kinase
kappa protein.
Length = 1271
Score = 30.7 bits (66), Expect = 9.1
Identities = 23/88 (26%), Positives = 30/88 (34%)
Frame = -1
Query: 587 SFPALSPXISGG*TVITRPLEXRLNNPASPGKPETXPRRQAEFXVEXGRKSRERGGPQIT 408
S PA P T P PA+ PE P E E + P++
Sbjct: 91 SEPAPEPATEPAPEPATEPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAPELA 150
Query: 407 PKTRPFSPRRRFGPEFSI*NAKKKKPFP 324
P+ P P PEF A + +P P
Sbjct: 151 PEPTP-EPVTELAPEFCPEAAPEFRPSP 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,030,360
Number of Sequences: 237096
Number of extensions: 2863332
Number of successful extensions: 4919
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4916
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13986681478
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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