Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G22
         (1034 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    32   1.5  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    32   1.5  
AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-P...    30   4.5  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = -1

Query: 509 PASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTR--PFSPRRRFGPEFSI*NAKKK 336
           P S G P+T P R           +   G PQ  P     P  P  + GPE+   +  K 
Sbjct: 141 PPSYGPPQTPPPRPPPQPTPSA-PAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKP 199

Query: 335 KPFPHQPSPP 306
           +P P +P PP
Sbjct: 200 RPTPSRPQPP 209


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = -1

Query: 509 PASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTR--PFSPRRRFGPEFSI*NAKKK 336
           P S G P+T P R           +   G PQ  P     P  P  + GPE+   +  K 
Sbjct: 141 PPSYGPPQTPPPRPPPQPTPSA-PAPSYGPPQPQPPAPQPPSPPSPQPGPEYLPPDQPKP 199

Query: 335 KPFPHQPSPP 306
           +P P +P PP
Sbjct: 200 RPTPSRPQPP 209


>AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-PA
            protein.
          Length = 3687

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 673  SPMEKTPSKXGLFYXFPGLLAGPFWLNMV 587
            SP+EK P   G FY   G+ + PF+ N V
Sbjct: 3552 SPVEKGPGCGGQFYNTEGIFSNPFYPNNV 3580


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,596,860
Number of Sequences: 53049
Number of extensions: 814267
Number of successful extensions: 1710
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5269947732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)