Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G22
         (1034 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    31   1.8  
AL032651-1|CAB60580.1|  681|Caenorhabditis elegans Hypothetical ...    29   5.4  
AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical...    28   9.5  

>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
 Frame = -1

Query: 503 SPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPF-----SPRRRFGPEFSI*NAKK 339
           SP K    PRR+        R  R R  P   P+ R       SPRRR  P  S   ++ 
Sbjct: 456 SPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSS-RSRS 514

Query: 338 KKPFPHQP 315
             P P +P
Sbjct: 515 PPPPPRRP 522


>AL032651-1|CAB60580.1|  681|Caenorhabditis elegans Hypothetical
           protein Y6D1A.1 protein.
          Length = 681

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = +2

Query: 557 QKSXGITQEKNHVEPKRASQKARKPV--KKAXFAGRF-FHRAPPPLNEPSQKSXXQVRGG 727
           Q+S    Q+  H    R S+ AR  V   +  +  R  F R+P P   P + S    RGG
Sbjct: 151 QRSITSRQQNYHDHSGRGSRGARSSVGTSRQQYGRRMSFDRSPSPSRAPGRGSRISDRGG 210

Query: 728 ETR 736
           + R
Sbjct: 211 DYR 213


>AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.1 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -1

Query: 512 NPASPGKPETXPRRQAEFXVEXGRKSRERGGPQITPKTRPFSPRRRFGPEFSI*NAKKKK 333
           NP    KP+  P+ + E   +   KS  +  P++ PK +P +P+    P   +    K K
Sbjct: 236 NPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKP-NPKPEPNPMPELKPKPKHK 294

Query: 332 PFPHQPSP 309
           P   +P P
Sbjct: 295 P-NSRPKP 301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,174,218
Number of Sequences: 27780
Number of extensions: 401783
Number of successful extensions: 832
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2741106356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)