Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G21
         (903 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC; ...    83   9e-15
UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c oxi...    70   7e-11
UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p...    66   9e-10
UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;...    60   6e-08
UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C, mitoch...    54   5e-06
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma...    39   0.15 
UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella ve...    36   1.4  

>UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC;
           n=4; Endopterygota|Rep: Cytochrome c oxidase polypeptide
           VIIC - Aedes aegypti (Yellowfever mosquito)
          Length = 67

 Score = 83.0 bits (196), Expect = 9e-15
 Identities = 37/60 (61%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
 Frame = +3

Query: 138 LGRNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 314
           + R  +TN VR +HS+GGIPGENLPF + NRYKLT  FI++ GSGL AP+ + RHQLLK+
Sbjct: 8   ISRTGMTNLVRYSHSHGGIPGENLPFSLTNRYKLTALFIVFLGSGLGAPFFVLRHQLLKQ 67


>UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc; n=1; Graphocephala
           atropunctata|Rep: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc - Graphocephala atropunctata
          Length = 65

 Score = 70.1 bits (164), Expect = 7e-11
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = +3

Query: 144 RNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 311
           RN+ T+  R    GGIPG NLPF + N++KLT  F++Y GSG+S P+L+ RH L K
Sbjct: 10  RNLSTSLARRSQPGGIPGVNLPFSLDNKFKLTALFVVYFGSGMSVPFLMLRHSLTK 65


>UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p -
           Drosophila melanogaster (Fruit fly)
          Length = 66

 Score = 66.5 bits (155), Expect = 9e-10
 Identities = 29/65 (44%), Positives = 41/65 (63%)
 Frame = +3

Query: 120 LASQNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 299
           L   + + RN   + VR   +GG+PGENLPF + N+Y++T  F +    G  +P+LI RH
Sbjct: 2   LGRSSVIARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVRH 61

Query: 300 QLLKK 314
           QLLKK
Sbjct: 62  QLLKK 66


>UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 71

 Score = 60.5 bits (140), Expect = 6e-08
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +3

Query: 171 NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 311
           +H   G PG NLP +I NRY LT  FIL+ GSGLS P+L+ R+ LLK
Sbjct: 25  DHGPEGYPGANLPINIQNRYVLTATFILFFGSGLSLPFLVLRYHLLK 71


>UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C,
           mitochondrial precursor; n=46; Deuterostomia|Rep:
           Cytochrome c oxidase subunit 7C, mitochondrial precursor
           - Homo sapiens (Human)
          Length = 63

 Score = 54.0 bits (124), Expect = 5e-06
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +3

Query: 144 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 311
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P+L+ RHQLLK
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
           Magnoliophyta|Rep: Putative reverse transcriptase -
           Zingiber officinale (Ginger)
          Length = 49

 Score = 39.1 bits (87), Expect = 0.15
 Identities = 16/22 (72%), Positives = 16/22 (72%)
 Frame = +1

Query: 724 AXMNRPXXGXRRFGYWXLFRFL 789
           A MNRP  G RRF YW LFRFL
Sbjct: 26  ALMNRPTRGERRFAYWALFRFL 47


>UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 78

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 192 PGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 311
           PG N+PF   N+ +L +  + Y G+  + P++  R Q+ K
Sbjct: 35  PGLNMPFQTQNKTRLLIVMVAYLGTCFALPFVAVRFQMAK 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,237,268
Number of Sequences: 1657284
Number of extensions: 9585596
Number of successful extensions: 18233
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18232
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)