BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G21 (903 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 27 2.8 SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 27 4.8 SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 6.4 >SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr 2|||Manual Length = 1471 Score = 27.5 bits (58), Expect = 2.8 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -2 Query: 233 LVTVVNVEG*ILARNTAVRMVSHEIRYHISAQFVLRC 123 L+T NV +L R+ V ++ E YHI Q + C Sbjct: 233 LITGANVNTYLLERSRVVSLLKGERNYHIFYQLITGC 269 >SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1427 Score = 26.6 bits (56), Expect = 4.8 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = +3 Query: 198 ENLPFDIHNRYKLTLYFILYAGSGLSAPYL 287 E F+++N Y LTL+ I++ AP++ Sbjct: 472 EKRSFEVNNMYSLTLFDIIFKSGMKIAPFI 501 >SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosaccharomyces pombe|chr 2|||Manual Length = 948 Score = 26.2 bits (55), Expect = 6.4 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = +1 Query: 247 SSYMRALDYQHPISSPVTSF*RSNSSCRDPLLVLGLS**KTVHYESLWMSKINYM 411 +S L Y PI+SP TS N D + LS + +S S INY+ Sbjct: 178 TSVSSTLTYHTPIASPTTSSNSDNEYTVDVITSSSLSSFVITNVDSTTTSVINYI 232 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,576,686 Number of Sequences: 5004 Number of extensions: 40946 Number of successful extensions: 92 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 92 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 456499320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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