BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G21 (903 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z83216-2|CAB05673.1| 315|Caenorhabditis elegans Hypothetical pr... 31 1.5 Z83107-7|CAB05501.2| 537|Caenorhabditis elegans Hypothetical pr... 31 1.5 Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical pr... 30 2.6 >Z83216-2|CAB05673.1| 315|Caenorhabditis elegans Hypothetical protein C08F11.2 protein. Length = 315 Score = 30.7 bits (66), Expect = 1.5 Identities = 13/54 (24%), Positives = 32/54 (59%) Frame = -2 Query: 185 AVRMVSHEIRYHISAQFVLRCESMGVIIFTFSTILELGITSKKQKFKFLRXSLL 24 AVR+ ++E+ H S + V++C +M ++ + TI+ + T+ ++ + + S + Sbjct: 247 AVRIFTYELSGHDSIEAVMQCVNM-IVPYLIPTIISISYTASRENLRAILSSFV 299 >Z83107-7|CAB05501.2| 537|Caenorhabditis elegans Hypothetical protein F32A7.6 protein. Length = 537 Score = 30.7 bits (66), Expect = 1.5 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +3 Query: 141 GRNVVTN-FVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPY 284 GRN N FV NGG+ G+N +D + + TL F + SG A Y Sbjct: 264 GRNGKGNIFVWASGNGGVNGDNCAYDGYVSNEYTLSFGVIDASGAPAAY 312 >Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical protein F26E4.6 protein. Length = 84 Score = 29.9 bits (64), Expect = 2.6 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = +3 Query: 180 NGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 311 N G LPF + N++ + + G AP+++ +QL K Sbjct: 38 NDGWASARLPFHVTNKWGFAAKAVTFLAIGFWAPFIVVEYQLRK 81 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,507,724 Number of Sequences: 27780 Number of extensions: 242902 Number of successful extensions: 455 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 445 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 455 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2297313942 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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