Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G19
         (1025 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   6.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.6
 Identities = 17/59 (28%), Positives = 22/59 (37%)
 Frame = +3

Query: 381 KKXXXGKRGXXXGGXXXFXGGGTTXX*XKXGGGGXKXKKKXFFFFXXXXXXXXWGGGGG 557
           K+   G  G   GG     GGG++      GGGG   + +              GGGGG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGG 254



 Score = 23.8 bits (49), Expect = 8.4
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +2

Query: 542 GGGGGXXXXXXXXXXXXXXXPPXPXGGGGG 631
           G GGG                P P GGGGG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 12/38 (31%), Positives = 12/38 (31%)
 Frame = +3

Query: 369 CGGKKKXXXGKRGXXXGGXXXFXGGGTTXX*XKXGGGG 482
           C           G   GG     GGGT       GGGG
Sbjct: 167 CNNHVSSNTNNNGTTNGGGELTTGGGTNGCTKAGGGGG 204


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,661
Number of Sequences: 2352
Number of extensions: 9566
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 113463324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)