BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G19 (1025 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.76 U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.76 AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.76 U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 7.1 U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 7.1 Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 9.4 Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 9.4 AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 9.4 >U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect protein 1, isoformb protein. Length = 1437 Score = 31.9 bits (69), Expect = 0.76 Identities = 19/54 (35%), Positives = 19/54 (35%) Frame = -1 Query: 293 GXXPPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPPG 132 G PP PPP G PP PP GG PP PPPG Sbjct: 733 GGLPPITGGPPPPPPPG--------GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778 Score = 30.3 bits (65), Expect = 2.3 Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%) Frame = -1 Query: 296 GGXXPPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGG-KXXPPXGPPPG 132 GG PP PPP PP PP GG K PP PPPG Sbjct: 740 GGPPPP----PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791 Score = 29.1 bits (62), Expect = 5.4 Identities = 19/54 (35%), Positives = 19/54 (35%) Frame = -1 Query: 284 PPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPPGXTP 123 PP PPP L G PP PP L PP PPPG P Sbjct: 720 PPITGGPPPPPPPGGL-PPITGGPPPP---PPPGGLPPISGGPPPPPPPPGGCP 769 >U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect protein 1, isoforma protein. Length = 1435 Score = 31.9 bits (69), Expect = 0.76 Identities = 19/54 (35%), Positives = 19/54 (35%) Frame = -1 Query: 293 GXXPPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPPG 132 G PP PPP G PP PP GG PP PPPG Sbjct: 733 GGLPPITGGPPPPPPPG--------GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778 Score = 30.3 bits (65), Expect = 2.3 Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%) Frame = -1 Query: 296 GGXXPPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGG-KXXPPXGPPPG 132 GG PP PPP PP PP GG K PP PPPG Sbjct: 740 GGPPPP----PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791 Score = 29.1 bits (62), Expect = 5.4 Identities = 19/54 (35%), Positives = 19/54 (35%) Frame = -1 Query: 284 PPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPPGXTP 123 PP PPP L G PP PP L PP PPPG P Sbjct: 720 PPITGGPPPPPPPGGL-PPITGGPPPP---PPPGGLPPISGGPPPPPPPPGGCP 769 >AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. Length = 1018 Score = 31.9 bits (69), Expect = 0.76 Identities = 19/54 (35%), Positives = 19/54 (35%) Frame = -1 Query: 293 GXXPPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPPG 132 G PP PPP G PP PP GG PP PPPG Sbjct: 316 GGLPPITGGPPPPPPPG--------GLPPISGGPPPPPPPPGGCPPPPPPPPPG 361 Score = 30.3 bits (65), Expect = 2.3 Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%) Frame = -1 Query: 296 GGXXPPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGG-KXXPPXGPPPG 132 GG PP PPP PP PP GG K PP PPPG Sbjct: 323 GGPPPP----PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374 Score = 29.1 bits (62), Expect = 5.4 Identities = 19/54 (35%), Positives = 19/54 (35%) Frame = -1 Query: 284 PPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPPGXTP 123 PP PPP L G PP PP L PP PPPG P Sbjct: 303 PPITGGPPPPPPPGGL-PPITGGPPPP---PPPGGLPPISGGPPPPPPPPGGCP 352 >U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform b protein. Length = 781 Score = 28.7 bits (61), Expect = 7.1 Identities = 15/44 (34%), Positives = 15/44 (34%) Frame = -1 Query: 266 PPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPP 135 PPP F PP PP L G PP PPP Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655 >U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform a protein. Length = 607 Score = 28.7 bits (61), Expect = 7.1 Identities = 15/44 (34%), Positives = 15/44 (34%) Frame = -1 Query: 266 PPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPP 135 PPP F PP PP L G PP PPP Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481 >Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein C33B4.3b protein. Length = 993 Score = 28.3 bits (60), Expect = 9.4 Identities = 15/47 (31%), Positives = 16/47 (34%) Frame = -2 Query: 556 PPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXWVVPPPXKXXXPP 416 PPPPPH + PPPP L PP PP Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816 >Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein C33B4.3a protein. Length = 1110 Score = 28.3 bits (60), Expect = 9.4 Identities = 15/47 (31%), Positives = 16/47 (34%) Frame = -2 Query: 556 PPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXWVVPPPXKXXXPP 416 PPPPPH + PPPP L PP PP Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816 >AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical protein Y63D3A.5 protein. Length = 486 Score = 28.3 bits (60), Expect = 9.4 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -1 Query: 194 PPXQXLKKGGKXXPPXGPPPGXTPXXFF 111 PP Q + G PP GPP G P F Sbjct: 321 PPPQGAPQQGFGAPPQGPPQGGPPQGSF 348 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,889,741 Number of Sequences: 27780 Number of extensions: 327588 Number of successful extensions: 809 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 349 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 682 length of database: 12,740,198 effective HSP length: 82 effective length of database: 10,462,238 effective search space used: 2709719642 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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