BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G19 (1025 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 26 0.63 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 5.9 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 25.8 bits (54), Expect = 0.63 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = -3 Query: 216 ETPXXXKPPXPXXKKGGEXXPPXGAPPXXNP 124 + P PP P +G P GAPP NP Sbjct: 32 QAPQRGSPPNP--SQGPPPGGPPGAPPSQNP 60 Score = 24.6 bits (51), Expect = 1.5 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = -1 Query: 218 GKPPXXLNPPXQXLKKGGKXXPPXGPPPGXTP 123 G P P Q ++G P GPPPG P Sbjct: 22 GPQPSPHQSP-QAPQRGSPPNPSQGPPPGGPP 52 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 22.6 bits (46), Expect = 5.9 Identities = 9/19 (47%), Positives = 9/19 (47%) Frame = -1 Query: 554 PPPPPXXXGXXXXKKKKXF 498 PPPPP G K K F Sbjct: 344 PPPPPSSSGPDSAKLDKIF 362 Score = 22.2 bits (45), Expect = 7.8 Identities = 9/19 (47%), Positives = 9/19 (47%) Frame = -1 Query: 179 LKKGGKXXPPXGPPPGXTP 123 L G GPPPG TP Sbjct: 372 LLSGRSQKSTTGPPPGPTP 390 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 199,457 Number of Sequences: 438 Number of extensions: 5582 Number of successful extensions: 5 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 58 effective length of database: 120,939 effective search space used: 34225737 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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