Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G19
(1025 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 32 0.71
At4g19200.1 68417.m02833 proline-rich family protein contains pr... 31 1.2
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 31 1.2
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 30 2.8
At5g62640.1 68418.m07862 proline-rich family protein contains pr... 29 3.8
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 29 3.8
At3g51290.1 68416.m05614 proline-rich family protein 29 3.8
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 29 3.8
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 29 3.8
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 5.0
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 29 6.6
At3g54580.1 68416.m06039 proline-rich extensin-like family prote... 29 6.6
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 29 6.6
At3g11402.1 68416.m01388 DC1 domain-containing protein contains ... 29 6.6
At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family... 29 6.6
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 28 8.7
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 28 8.7
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 28 8.7
At1g26240.1 68414.m03201 proline-rich extensin-like family prote... 28 8.7
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/66 (27%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = -2
Query: 631 PPPPPXXXGGXXXXGXXXXXXXXXX-PPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXX 455
PPPPP PPPPP + + ++ PPPP
Sbjct: 143 PPPPPVLLSPPPPPVLFSPPPPTVTRPPPPPTITRSPPPPRPQAAAYYKKTPPPPPYKYG 202
Query: 454 WVVPPP 437
V PPP
Sbjct: 203 RVYPPP 208
>At4g19200.1 68417.m02833 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 179
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 299 GGGXXPPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPPGXTP 123
GGG PP PP+ G PP P GG P G PP P
Sbjct: 21 GGGHYPPAQGGYPPQGYPPQQGYPPAGGYPPAGYPPGAYPAAPGGYPPAPGGYPPAGYP 79
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -2
Query: 556 PPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXWVVPPP 437
PPPPP + + PPPP +V PPP
Sbjct: 389 PPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPP 428
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = -2
Query: 631 PPPPPXXXGGXXXXGXXXXXXXXXXPPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXW 452
PPPPP PPPPP P PP L
Sbjct: 708 PPPPPAPPAPPTPIVHTSSPPPPPPPPPPPAPPTPQSNGISAMKSSPPAPPAPPRLPTHS 767
Query: 451 VVPPPXKXXXPP 416
PPP PP
Sbjct: 768 ASPPPPTAPPPP 779
>At5g62640.1 68418.m07862 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 520
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 212 PPXXLNPPXQXLKKGGKXX-PPXGPPPGXTP 123
PP ++PP + G PP GPPPG P
Sbjct: 360 PPLDMHPPHPGMFVGHLIPRPPYGPPPGPPP 390
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = -2
Query: 631 PPPPPXXXGGXXXXGXXXXXXXXXXPPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXW 452
PPPPP PPPPP + PPPP
Sbjct: 42 PPPPPYRSPVTIPPPPPVYSRPVAFPPPPPIYSPPPPPIYPPPIY---SPPPPPIYPPPI 98
Query: 451 VVPPPXKXXXPP 416
PPP PP
Sbjct: 99 YSPPPTPISPPP 110
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = -3
Query: 630 PPPPPXGXGGXXXXXXKXXXXXXXXPPPPPTXXXXXXXXKKKXFFFFXXPPP 475
PPPPP G PPPPP + F PPP
Sbjct: 81 PPPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTWDFWDPFIPPPP 132
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 210 PXXXKPPXPXXKKGGEXXPPXGAPPXXNP 124
P PP P GG PP G PP P
Sbjct: 675 PGGGPPPPPPPPGGGPPPPPGGGPPPPPP 703
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -1
Query: 284 PPXXXSPPPKXXXXFL*XXXXXGKPPXXLN--PPXQXLKKGGKXXPPXGPPPGXTP 123
PP PPP+ +PP PP GG PP G PP P
Sbjct: 648 PPRVPRPPPRSAGGGKSTNLPSARPPLPGGGPPPPPPPPGGGPPPPPGGGPPPPPP 703
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/71 (25%), Positives = 21/71 (29%)
Frame = -2
Query: 631 PPPPPXXXGGXXXXGXXXXXXXXXXPPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXW 452
PPPP PPPPPH + PPPP
Sbjct: 24 PPPPSLPPPVPPPPPSHQPYSYPPPPPPPPHAYYQQGPHYPQFNQLQAPPPPPPPSAPPP 83
Query: 451 VVPPPXKXXXP 419
+VP P + P
Sbjct: 84 LVPDPPRHQGP 94
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = -2
Query: 631 PPPPPXXXGGXXXXGXXXXXXXXXXPPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXW 452
PPPPP PPPPH PPPP
Sbjct: 537 PPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHS------PPPPIYPYLS 590
Query: 451 VVPPPXKXXXPP 416
PPP PP
Sbjct: 591 PPPPPTPVSSPP 602
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 28.7 bits (61), Expect = 6.6
Identities = 25/90 (27%), Positives = 28/90 (31%), Gaps = 3/90 (3%)
Frame = +3
Query: 372 GGKKKXXXGKRGXXXGGXXXFXG---GGTTXX*XKXGGGGXKXKKKXFFFFXXXXXXXXW 542
G + + GK G GG G GG GGGG +
Sbjct: 334 GNQNQGGGGKNGGKGGGGHPLDGKMGGGGGGPNGNKGGGGVQMNG------GPNGGKKGG 387
Query: 543 GGGGGXXXXXXXFXXPXXXXPPXXXGGGGG 632
GGGGG P P GGGGG
Sbjct: 388 GGGGGGGGGPMSGGLPPGFRPMGGGGGGGG 417
>At3g54580.1 68416.m06039 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 951
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/77 (25%), Positives = 22/77 (28%), Gaps = 5/77 (6%)
Frame = -2
Query: 631 PPPPPXXXGGXXXXGXXXXXXXXXXPPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXW 452
PPPP PPPP H K + PPPP+
Sbjct: 571 PPPPYYSPSPKVYYKSPPPPYVYSSPPPPYHSPSPKVQYKSPPPPYVYSSPPPPYYSPSP 630
Query: 451 VV-----PPPXKXXXPP 416
V PPP PP
Sbjct: 631 KVYYKSPPPPYVYSSPP 647
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/77 (25%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Frame = -2
Query: 631 PPPPPXXXGGXXXXGXXXXXXXXXXPPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXW 452
PPPP PPPP + K + PPPP+
Sbjct: 838 PPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPSP 897
Query: 451 VV-----PPPXKXXXPP 416
VV PPP PP
Sbjct: 898 VVDYKSPPPPYVYSSPP 914
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/77 (25%), Positives = 22/77 (28%), Gaps = 5/77 (6%)
Frame = -2
Query: 631 PPPPPXXXGGXXXXGXXXXXXXXXXPPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXW 452
PPPP PPPP H K + PPPP+
Sbjct: 639 PPPPCYSPSPKVVYKSSPPPYVYSSPPPPYHSPSPKVHYKSPPPPYVYSSPPPPYYSPSP 698
Query: 451 VV-----PPPXKXXXPP 416
V PPP PP
Sbjct: 699 KVHYKSPPPPYVYSSPP 715
>At3g11402.1 68416.m01388 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 708
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 630 PPPPPXGXGGXXXXXXKXXXXXXXXPPPPP 541
PPPPP G K PPPPP
Sbjct: 8 PPPPPSGFKRYKKKRSKKMDNKEVPPPPPP 37
>At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 561
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 554 PPPPPXXXGXXXXKKKKXFFFXFXPPPP 471
PPPPP G KK K PPPP
Sbjct: 370 PPPPPFFQGLFSSKKGKSKKNNSNPPPP 397
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = -2
Query: 556 PPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXWVVPPPXKXXXPP 416
PPPPP + + PPPP+ PPP + PP
Sbjct: 71 PPPPPQSLPPPSPSPEPEHY-----PPPPYHHYITPSPPPPRPLPPP 112
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 212 PPXXLNPPXQXLKKGGKXXPPXGPPPG 132
PP PP K G PP PPPG
Sbjct: 389 PPSAAAPPPPPPPKKGPAAPPPPPPPG 415
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = -1
Query: 284 PPXXXSPPPKXXXXFL*XXXXXGKPPXXLNPPXQXLKKGGKXXPPXGPPPGXTP 123
PP PPP + G PP PP + K PP PPP P
Sbjct: 51 PPPPPPPPPPPPPPAVNMSVETGIPPPP--PPVTDMIKPLSSPPPPQPPPRSQP 102
>At1g26240.1 68414.m03201 proline-rich extensin-like family protein
similar to hydroxyproline-rich glycoprotein precursor
gi|727264|gb|AAA87902; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 478
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/72 (26%), Positives = 24/72 (33%)
Frame = -2
Query: 631 PPPPPXXXGGXXXXGXXXXXXXXXXPPPPPHXXXXXXXXKKKXXFFFXXXPPPPFLXXXW 452
PPPPP PPPPP+ + + PPPP++
Sbjct: 70 PPPPPYVYSSPPPP-----PYIYKSPPPPPYVYSSPPPPP----YIYKSPPPPPYVYSS- 119
Query: 451 VVPPPXKXXXPP 416
PPP PP
Sbjct: 120 PPPPPYVYKSPP 131
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,381,522
Number of Sequences: 28952
Number of extensions: 363337
Number of successful extensions: 1130
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2511392464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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