Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G16
         (918 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0197 + 21884415-21885332,21886130-21886750                       29   5.2  
01_01_1082 - 8516525-8517409                                           29   5.2  
01_01_0363 + 2850954-2853675,2853819-2854225                           29   5.2  

>03_05_0197 + 21884415-21885332,21886130-21886750
          Length = 512

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 256 RTGVPPPNAFKKSIRLAQGAWWIVLVVDSVSHCXLN 363
           R+  PPP   KK +RL  G W + L V S+ H  L+
Sbjct: 29  RSWWPPPEKEKKKLRLPPGPWQLPL-VGSLHHVLLS 63


>01_01_1082 - 8516525-8517409
          Length = 294

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = +1

Query: 64  ASXLTFLQKLIEXSQXN*LRXSWLTRHFG*TKKLILAPVGLQKRWANRLENKTKTKMQEH 243
           A  LT L ++++  +   L    +TRHF    K  LAP+  + R A   + K+  K ++ 
Sbjct: 198 AQALTLLNRMLKLKEQG-LHGEQITRHF---IKSWLAPIKERSRTAFEFDGKSDPKREDP 253

Query: 244 GSLE 255
            SLE
Sbjct: 254 ESLE 257


>01_01_0363 + 2850954-2853675,2853819-2854225
          Length = 1042

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 129  MVDKTLWLNEEANSGSGRAAKT 194
            + D+T+WL+EEAN   G  A T
Sbjct: 963  IADRTIWLHEEANDTDGTNAST 984


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,132,876
Number of Sequences: 37544
Number of extensions: 288620
Number of successful extensions: 788
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)