Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G16
         (918 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542121-1|CAG46918.1|  105|Homo sapiens NDUFB2 protein.               45   3e-04
BC063026-1|AAH63026.1|   95|Homo sapiens NDUFB2 protein protein.       45   3e-04
AF050639-1|AAD05428.1|  105|Homo sapiens NADH-ubiquinone oxidore...    45   3e-04
AC006344-2|AAD43191.1|   95|Homo sapiens NADH-ubiquinone oxidore...    45   3e-04

>CR542121-1|CAG46918.1|  105|Homo sapiens NDUFB2 protein.
          Length = 105

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +2

Query: 371 ITGEWPYIDPSTWTDEELGIPPD 439
           + G +PY DPS WTDEELGIPPD
Sbjct: 80  VLGHFPYPDPSQWTDEELGIPPD 102


>BC063026-1|AAH63026.1|   95|Homo sapiens NDUFB2 protein protein.
          Length = 95

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +2

Query: 371 ITGEWPYIDPSTWTDEELGIPPD 439
           + G +PY DPS WTDEELGIPPD
Sbjct: 70  VLGHFPYPDPSQWTDEELGIPPD 92


>AF050639-1|AAD05428.1|  105|Homo sapiens NADH-ubiquinone
           oxidoreductase AGGG subunit protein.
          Length = 105

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +2

Query: 371 ITGEWPYIDPSTWTDEELGIPPD 439
           + G +PY DPS WTDEELGIPPD
Sbjct: 80  VLGHFPYPDPSQWTDEELGIPPD 102


>AC006344-2|AAD43191.1|   95|Homo sapiens NADH-ubiquinone
           oxidoreductase AGGG subunit protein.
          Length = 95

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +2

Query: 371 ITGEWPYIDPSTWTDEELGIPPD 439
           + G +PY DPS WTDEELGIPPD
Sbjct: 70  VLGHFPYPDPSQWTDEELGIPPD 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,169,543
Number of Sequences: 237096
Number of extensions: 1621132
Number of successful extensions: 3320
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3319
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)