BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G16 (918 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.9 DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 6.8 EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 9.0 EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 9.0 AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 9.0 >AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate receptor 1 protein. Length = 953 Score = 23.4 bits (48), Expect = 2.9 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = -1 Query: 477 IYFAINALCNPAESGGIPSSSSVHVLGSI 391 ++FA L N G P S S VLG + Sbjct: 614 VWFAWGVLLNSGIGEGTPRSFSARVLGMV 642 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 22.2 bits (45), Expect = 6.8 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +3 Query: 18 PSLLGAFLTDFCAFWGKXFNLPPKINRGXSTXLTQXIMVDK 140 PS+L ++ + +FW PP+I G +T LT + K Sbjct: 241 PSILIVVIS-WVSFWLHMDASPPRIVLGTNTILTFMTLASK 280 >EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. Length = 686 Score = 21.8 bits (44), Expect = 9.0 Identities = 7/21 (33%), Positives = 13/21 (61%) Frame = -2 Query: 461 MLYATLLNQEEFQALHQSMYW 399 ML+ L N ++FQ +++ W Sbjct: 110 MLFELLYNAKDFQTFYKTAAW 130 >EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. Length = 686 Score = 21.8 bits (44), Expect = 9.0 Identities = 7/21 (33%), Positives = 13/21 (61%) Frame = -2 Query: 461 MLYATLLNQEEFQALHQSMYW 399 ML+ L N ++FQ +++ W Sbjct: 110 MLFELLYNAKDFQTFYKTAAW 130 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 21.8 bits (44), Expect = 9.0 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = +3 Query: 228 ENAGTWEFGTYRC 266 E +G W FGT C Sbjct: 102 EISGNWSFGTIMC 114 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 163,083 Number of Sequences: 438 Number of extensions: 3040 Number of successful extensions: 7 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 58 effective length of database: 120,939 effective search space used: 29871933 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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