Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G15
         (883 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    25   1.0  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    25   1.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.7  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 380 KTEKLVLAAEVQSLKLASPKTXFKYNRKAKEPIVRSDALEVDY 508
           KT  LVL   V S+  A+ K   KY+      I++SD L  +Y
Sbjct: 2   KTLVLVLFVAVLSVVFAADKYTTKYDNIDLNQILKSDRLLKNY 44


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 380 KTEKLVLAAEVQSLKLASPKTXFKYNRKAKEPIVRSDALEVDY 508
           KT  LVL   V S+  A+ K   KY+      I++SD L  +Y
Sbjct: 2   KTLVLVLFVAVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNY 44


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 418 LKIGFAENNXQIQ*ESQRANCKK 486
           LKI   E+  Q+  +++RA C++
Sbjct: 104 LKINLPESRVQVWFKNRRAKCRQ 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,673
Number of Sequences: 336
Number of extensions: 3197
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)