Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G13
         (873 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12465-1|AAA51648.1|  123|Homo sapiens ribosomal protein L35 pro...    53   1e-06
CR456877-1|CAG33158.1|  123|Homo sapiens RPL35 protein.                53   1e-06
BC094828-1|AAH94828.1|  123|Homo sapiens ribosomal protein L35 p...    53   1e-06
BC071915-1|AAH71915.1|  123|Homo sapiens ribosomal protein L35 p...    53   1e-06
BC010919-1|AAH10919.1|  123|Homo sapiens RPL35 protein protein.        53   1e-06
BC000348-1|AAH00348.1|  123|Homo sapiens ribosomal protein L35 p...    53   1e-06
AL354928-8|CAI39639.1|  123|Homo sapiens ribosomal protein L35 p...    53   1e-06
AL354928-7|CAI39638.1|   95|Homo sapiens ribosomal protein L35 p...    53   1e-06
AB046409-1|BAB21255.1|   33|Homo sapiens ribosomal protein L35 p...    53   2e-06

>U12465-1|AAA51648.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 63


>CR456877-1|CAG33158.1|  123|Homo sapiens RPL35 protein.
          Length = 123

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 63


>BC094828-1|AAH94828.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 63


>BC071915-1|AAH71915.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 63


>BC010919-1|AAH10919.1|  123|Homo sapiens RPL35 protein protein.
          Length = 123

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 63


>BC000348-1|AAH00348.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 63


>AL354928-8|CAI39639.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 29  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 63


>AL354928-7|CAI39638.1|   95|Homo sapiens ribosomal protein L35
           protein.
          Length = 95

 Score = 53.2 bits (122), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +2

Query: 176 TNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           + LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 28  SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 62


>AB046409-1|BAB21255.1|   33|Homo sapiens ribosomal protein L35
           protein.
          Length = 33

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +2

Query: 182 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 280
           LRVAKVTGG ASKLSKIRVVRK+IARV  V +Q
Sbjct: 1   LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,073,970
Number of Sequences: 237096
Number of extensions: 545336
Number of successful extensions: 676
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)