Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G12
         (907 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    27   1.0  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    25   2.4  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   3.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   7.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   7.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.6  

>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = -1

Query: 379 SSMLANKTVVFTTDSNEAPPASSTCRRLSRA*RVCASAPPQTICASRSNPRIPE 218
           +S+LA  +  FTT       ASS C  + R   VC ++  QT   + S P  PE
Sbjct: 43  ASLLAIYSKRFTTPEETQFLASSRCGEIGRKTLVCCASEQQT--RTSSFPTSPE 94


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 264 HRRPSVHLDPIREFQKCIRSCPLKLLDCTDL 172
           H  P     P  EFQ+C  +CP    D  DL
Sbjct: 28  HPYPYDLCGPNEEFQECGTACPKTCADLNDL 58


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 390 KFGSR-PC*LTKQ*FSRPTPTKRHQLQVHVADCPEPDGSALQHHRRP 253
           +F +R P   T+  ++  TPT  H+L    +  P+P+ ++ Q    P
Sbjct: 304 RFTTRTPATSTEHRYTTRTPTTTHRLAARTSTPPDPETTSSQQCHPP 350


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 348 SRPTPTKRHQLQVHVADCPEPDGSALQHHRRP 253
           S+P+P ++ QL  H AD P    S  Q  RRP
Sbjct: 20  SKPSPQQQQQL--HSADVPH--SSTSQSSRRP 47


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 348 SRPTPTKRHQLQVHVADCPEPDGSALQHHRRP 253
           S+P+P ++ QL  H AD P    S  Q  RRP
Sbjct: 20  SKPSPQQQQQL--HSADVPH--SSTSQSSRRP 47


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 344 DRLQRSATSFKYMSQIVQSLTGLRFSTTADHLCIS 240
           +R   +AT+ +Y+S   Q++ GLR  T   HL +S
Sbjct: 69  NRHNDNATA-EYLSCYYQNVRGLRTKTKEFHLAVS 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,686
Number of Sequences: 2352
Number of extensions: 13762
Number of successful extensions: 50
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)