BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G11 (890 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical... 31 0.84 AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 31 1.1 AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 31 1.1 AF040643-1|AAB94960.1| 998|Caenorhabditis elegans Hypothetical ... 30 1.9 Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 28 7.8 >AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical protein Y48G1C.7 protein. Length = 623 Score = 31.5 bits (68), Expect = 0.84 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +3 Query: 732 PDEFSGYVGALKVSGSQQRTSRLHPSHIHQEILRIARRYTPA 857 P E V +S +Q+ + + P HI +++LR+ R TPA Sbjct: 272 PGEMPAPVNVSTMSSAQEYSLQRLPPHIREDVLRLLARMTPA 313 >AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical protein C36B7.5b protein. Length = 1148 Score = 31.1 bits (67), Expect = 1.1 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Frame = -2 Query: 343 WVFWRP-----RTCLPGRLERNRLASAERNSDTPFYLWRECSLV*PW-IWSEY 203 W W P TC G ++RNR+ RN D P C + P WS + Sbjct: 351 WTLWSPWSLCTATCGVGEIQRNRVCQTGRNCDGPSVEVEACKALLPCPTWSSW 403 >AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical protein C36B7.5a protein. Length = 1121 Score = 31.1 bits (67), Expect = 1.1 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Frame = -2 Query: 343 WVFWRP-----RTCLPGRLERNRLASAERNSDTPFYLWRECSLV*PW-IWSEY 203 W W P TC G ++RNR+ RN D P C + P WS + Sbjct: 351 WTLWSPWSLCTATCGVGEIQRNRVCQTGRNCDGPSVEVEACKALLPCPTWSSW 403 >AF040643-1|AAB94960.1| 998|Caenorhabditis elegans Hypothetical protein F14D2.6 protein. Length = 998 Score = 30.3 bits (65), Expect = 1.9 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = +1 Query: 415 VIVIHKDLPIDNLDQLKGLKSCHTGVNRNVGY-KIPLTMLMKRAVFPKMNDHSISPKENE 591 ++V+ ++NLD L+ L+ + N ++ L++ FPK+ SPK N Sbjct: 843 LLVVKSTAKLENLDFLENLEQIVSLENSTSPIIQLSSNKLLQNVNFPKIKTPLFSPKNNH 902 Query: 592 LRALXDVLHEILAS*VNGLRIRKQT 666 + D EI+ S ++ +++ T Sbjct: 903 YIEIVDNKQEIIYSQMSCFKLQNLT 927 >Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical protein B0250.4 protein. Length = 480 Score = 28.3 bits (60), Expect = 7.8 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +3 Query: 657 KTNSAWKXQYNKLCSMCE 710 KTN+ W YNK CS E Sbjct: 173 KTNTVWNKNYNKFCSFKE 190 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,052,724 Number of Sequences: 27780 Number of extensions: 475559 Number of successful extensions: 1201 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1201 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2255353870 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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