BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G11 (890 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 195 4e-52 AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 195 4e-52 AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 195 4e-52 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.6 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.8 DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.7 DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 8.6 >AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 195 bits (476), Expect = 4e-52 Identities = 104/248 (41%), Positives = 142/248 (57%), Gaps = 4/248 (1%) Frame = +1 Query: 115 WICACVNAAKITYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQQRQAD 294 ++ A +++ + ICVP + K C +M + + CI RDR EC+ V +++AD Sbjct: 22 FVIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEAD 81 Query: 295 FVPVDPEDMYVAAK----IPNQDFVVFQEYRTDEEPDAPFRYEAVIVIHKDLPIDNLDQL 462 V VDPEDMY+A K N + V ++ RT EEP AP+RYEAV VIHKDLPI+N+ L Sbjct: 82 VVAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGL 141 Query: 463 KGLKSCHTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELRALXDVLHEILAS*VN 642 +GLKSCHTGV RNVGYKIP+T L V ++D S +ENELRAL + + Sbjct: 142 RGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRALSSLFSKGCLVGTW 201 Query: 643 GLRIRKQTRLGRXNTTSYALCANIQRDATIPTNSAATWAH*KCLAHNNGQVAFTQVIFTR 822 RL + ALC P + +CLAHN G++A+T+VI+ + Sbjct: 202 SPDPAINRRLKETYSNMCALCEK-PEVCDYPDIYSGYEGALRCLAHNGGEIAWTKVIYVK 260 Query: 823 KFFGLPVG 846 +FFGLPVG Sbjct: 261 RFFGLPVG 268 Score = 43.2 bits (97), Expect = 3e-06 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 1/112 (0%) Frame = +1 Query: 232 DCIPARDRMECLNYVQQRQADFVPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYE 411 DC + + +CL +++ AD V + A K N ++ + Y + Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473 Query: 412 AVIVIHKDLPIDNLDQLKGLKSCHTGVNRN-VGYKIPLTMLMKRAVFPKMND 564 AV V+ K I+ L+ L+ KSCH+G + G+ P+ L ++ + N+ Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525 >AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 195 bits (476), Expect = 4e-52 Identities = 104/248 (41%), Positives = 142/248 (57%), Gaps = 4/248 (1%) Frame = +1 Query: 115 WICACVNAAKITYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQQRQAD 294 ++ A +++ + ICVP + K C +M + + CI RDR EC+ V +++AD Sbjct: 22 FVIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEAD 81 Query: 295 FVPVDPEDMYVAAK----IPNQDFVVFQEYRTDEEPDAPFRYEAVIVIHKDLPIDNLDQL 462 V VDPEDMY+A K N + V ++ RT EEP AP+RYEAV VIHKDLPI+N+ L Sbjct: 82 VVAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGL 141 Query: 463 KGLKSCHTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELRALXDVLHEILAS*VN 642 +GLKSCHTGV RNVGYKIP+T L V ++D S +ENELRAL + + Sbjct: 142 RGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRALSSLFSKGCLVGTW 201 Query: 643 GLRIRKQTRLGRXNTTSYALCANIQRDATIPTNSAATWAH*KCLAHNNGQVAFTQVIFTR 822 RL + ALC P + +CLAHN G++A+T+VI+ + Sbjct: 202 SPDPAINRRLKETYSNMCALCEK-PEVCDYPDIYSGYEGALRCLAHNGGEIAWTKVIYVK 260 Query: 823 KFFGLPVG 846 +FFGLPVG Sbjct: 261 RFFGLPVG 268 Score = 43.2 bits (97), Expect = 3e-06 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 1/112 (0%) Frame = +1 Query: 232 DCIPARDRMECLNYVQQRQADFVPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYE 411 DC + + +CL +++ AD V + A K N ++ + Y + Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473 Query: 412 AVIVIHKDLPIDNLDQLKGLKSCHTGVNRN-VGYKIPLTMLMKRAVFPKMND 564 AV V+ K I+ L+ L+ KSCH+G + G+ P+ L ++ + N+ Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525 >AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. Length = 712 Score = 195 bits (476), Expect = 4e-52 Identities = 104/248 (41%), Positives = 142/248 (57%), Gaps = 4/248 (1%) Frame = +1 Query: 115 WICACVNAAKITYKICVPSQHLKACQDMVDIPTKSKVTLDCIPARDRMECLNYVQQRQAD 294 ++ A +++ + ICVP + K C +M + + CI RDR EC+ V +++AD Sbjct: 22 FVIAAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYECIEKVGKKEAD 81 Query: 295 FVPVDPEDMYVAAK----IPNQDFVVFQEYRTDEEPDAPFRYEAVIVIHKDLPIDNLDQL 462 V VDPEDMY+A K N + V ++ RT EEP AP+RYEAV VIHKDLPI+N+ L Sbjct: 82 VVAVDPEDMYLAVKDNKLASNAGYNVIEQVRTKEEPHAPYRYEAVAVIHKDLPINNVQGL 141 Query: 463 KGLKSCHTGVNRNVGYKIPLTMLMKRAVFPKMNDHSISPKENELRALXDVLHEILAS*VN 642 +GLKSCHTGV RNVGYKIP+T L V ++D S +ENELRAL + + Sbjct: 142 RGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDPEYSARENELRALSSLFSKGCLVGTW 201 Query: 643 GLRIRKQTRLGRXNTTSYALCANIQRDATIPTNSAATWAH*KCLAHNNGQVAFTQVIFTR 822 RL + ALC P + +CLAHN G++A+T+VI+ + Sbjct: 202 SPDPAINRRLKETYSNMCALCEK-PEVCDYPDIYSGYEGALRCLAHNGGEIAWTKVIYVK 260 Query: 823 KFFGLPVG 846 +FFGLPVG Sbjct: 261 RFFGLPVG 268 Score = 43.2 bits (97), Expect = 3e-06 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 1/112 (0%) Frame = +1 Query: 232 DCIPARDRMECLNYVQQRQADFVPVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYE 411 DC + + +CL +++ AD V + A K N ++ + Y + Sbjct: 416 DCTLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEYNTVPIIAESYGSGSTNFN--ERP 473 Query: 412 AVIVIHKDLPIDNLDQLKGLKSCHTGVNRN-VGYKIPLTMLMKRAVFPKMND 564 AV V+ K I+ L+ L+ KSCH+G + G+ P+ L ++ + N+ Sbjct: 474 AVAVVSKSSSINKLEDLRNKKSCHSGYKDSFAGWTAPIYTLKRKGLIKSENE 525 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 24.2 bits (50), Expect = 1.6 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = +1 Query: 748 ATWAH*KCLAHNNGQVAFTQVIF 816 ATW H + AHNN A + F Sbjct: 1527 ATWYHLRVTAHNNAGFAVAEYEF 1549 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 23.4 bits (48), Expect = 2.8 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = -2 Query: 127 MHKSRVIKMKYFKAIVKATDKL 62 M K ++K + F++ +KA+DKL Sbjct: 651 MEKLMMLKHREFRSSIKASDKL 672 >DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monooxygenase protein. Length = 517 Score = 23.0 bits (47), Expect = 3.7 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 433 DLPIDNLDQLKGLKSCHT 486 DL IDNL + K L++C T Sbjct: 369 DLTIDNLRKAKYLRACIT 386 >DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein protein. Length = 486 Score = 21.8 bits (44), Expect = 8.6 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +2 Query: 56 LTELVGCLDNGFKIFHFD 109 LT L+GCL G +I D Sbjct: 211 LTGLIGCLTLGRRILRLD 228 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 254,091 Number of Sequences: 438 Number of extensions: 5526 Number of successful extensions: 25 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 58 effective length of database: 120,939 effective search space used: 28783482 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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