Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G10
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.4  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   5.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.4  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 93  NLFYIFATTLGVC*RRSLRTF*LRGRLLDQRAILKGDTLVTSLGTN 230
           NL+Y F  +      RSL+     G +L++  + +   LV SL  N
Sbjct: 178 NLYYSFYISDKAARPRSLQFVDSEGNILEEFVLSRAGGLVNSLYQN 223


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 71  DTTQNEYKSVLYLRYNSGCV 130
           D T+ +YKS+  L+Y   C+
Sbjct: 32  DDTKPDYKSLQELKYMERCI 51


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 310 LSVVTSFSKESIIVLSQSAKDLASPHLFVPSDVTRVSPL 194
           LS ++S +    +VL   +  +ASP + V S     SPL
Sbjct: 687 LSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPL 725


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 310 LSVVTSFSKESIIVLSQSAKDLASPHLFVPSDVTRVSPL 194
           LS ++S +    +VL   +  +ASP + V S     SPL
Sbjct: 579 LSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPL 617


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 539 GLQGVRSQKTRRRSSAEIRHDW*SPQHL 622
           G  G    ++   SS+  RH+W +  HL
Sbjct: 414 GGSGQNQPESPESSSSTPRHEWVAQNHL 441


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,640
Number of Sequences: 336
Number of extensions: 4333
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)