Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G10
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         39   0.004
07_03_1507 - 27228032-27228742                                         30   2.1  
01_06_0554 + 30179641-30179658,30179725-30180126,30180580-301808...    29   3.6  
07_01_0378 + 2826421-2826427,2827286-2827375,2827400-2827639,282...    28   8.3  
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    28   8.3  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 28/56 (50%), Positives = 35/56 (62%)
 Frame = -3

Query: 390  LVLSPPGPKTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPPPICLS 223
            ++LSPP  K+L P A PVSLP   +K SL  P  P +P S  P V K+LPPP  +S
Sbjct: 1254 VILSPPAVKSLPPPA-PVSLPPPPVK-SL--P--PPAPVSLPPPVVKSLPPPAPVS 1303


>07_03_1507 - 27228032-27228742
          Length = 236

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = -3

Query: 423 SCSPSLGVRRSLVLSPPGPKTLVP*A*PVSLPRSSLK---ISLL*PAFPKSPSSFCPKVP 253
           S SPS    R   LSPP P T    + P SL R+S +   IS+   AFP +PS+  P  P
Sbjct: 39  SLSPSDSCSRRAPLSPPSPSTFG--SPPTSL-RTSFRLGVISIGFAAFPSTPSA-SPFRP 94

Query: 252 KTLPPPICLSQVTS 211
            T   P   S  T+
Sbjct: 95  PTAGAPSSSSSRTA 108


>01_06_0554 +
           30179641-30179658,30179725-30180126,30180580-30180892,
           30180966-30181358,30181442-30182427
          Length = 703

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 71  DTTQNEYKSVLYLRYNSGCVLTQKFTDLLITRKITRSAGNPQGRHPRDV 217
           D +  EY+ +L+ RY+           L    K+ RS+G+PQG+ P D+
Sbjct: 67  DNSLREYEFLLF-RYDDNMHFMVLPFGLNACEKVIRSSGSPQGKLPCDI 114


>07_01_0378 +
           2826421-2826427,2827286-2827375,2827400-2827639,
           2827722-2828035,2828604-2828696,2828789-2828977
          Length = 310

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
 Frame = +2

Query: 164 RKITRSAGNPQGRHPRDVTWDKQMGGGKVFGTLGQN---DDGLFGKAGYNREIFNDDRGK 334
           R ++ +  NP  R      W +  G G  +G  G N     G FG    +  ++ +    
Sbjct: 82  RNLSANVNNPVSRPMPQRPWQQTSGYGNTYGGYGSNMYSSYGGFGNTYGSGGLYGNSMYS 141

Query: 335 LTGQAYGTRVLGPGG 379
             G  YG  + G  G
Sbjct: 142 SYGGGYGGSLYGGSG 156


>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 393  YGGRLDWANKNAQATIDLNRQI 458
            +GG L W N + ++T+D +RQ+
Sbjct: 963  HGGSLPWKNTDFESTVDFDRQL 984


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,441,884
Number of Sequences: 37544
Number of extensions: 519450
Number of successful extensions: 1476
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)