Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G10
(857 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050393-1|AAH50393.1| 367|Homo sapiens F-box protein 25 protein. 32 2.3
BC020249-1|AAH20249.1| 291|Homo sapiens F-box protein 25 protein. 32 2.3
AF419858-1|AAP97293.1| 358|Homo sapiens unknown protein. 32 2.3
AF321609-1|AAT09768.1| 834|Homo sapiens titin protein. 32 2.3
AF174605-1|AAF04526.1| 272|Homo sapiens F-box protein Fbx25 pro... 32 2.3
AB070270-1|BAB85128.1| 358|Homo sapiens F-box domain Fbx25-cont... 32 2.3
AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein. 31 5.4
AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein. 31 5.4
AJ277892-6|CAD12460.1| 454|Homo sapiens Titin fetal Isoform pro... 31 5.4
AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein. 31 5.4
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 31 7.1
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 31 7.1
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 7.1
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 7.1
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 7.1
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 7.1
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 7.1
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 7.1
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 7.1
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 7.1
>BC050393-1|AAH50393.1| 367|Homo sapiens F-box protein 25 protein.
Length = 367
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -1
Query: 476 HPRSATDLSI*VNSGLCILVRPV*ASAVV-----WCCRLQVLKLW 357
+PR DL ++S LCIL+R V S +V W CRL+ + W
Sbjct: 165 NPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAW 209
>BC020249-1|AAH20249.1| 291|Homo sapiens F-box protein 25 protein.
Length = 291
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -1
Query: 476 HPRSATDLSI*VNSGLCILVRPV*ASAVV-----WCCRLQVLKLW 357
+PR DL ++S LCIL+R V S +V W CRL+ + W
Sbjct: 98 NPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAW 142
>AF419858-1|AAP97293.1| 358|Homo sapiens unknown protein.
Length = 358
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -1
Query: 476 HPRSATDLSI*VNSGLCILVRPV*ASAVV-----WCCRLQVLKLW 357
+PR DL ++S LCIL+R V S +V W CRL+ + W
Sbjct: 165 NPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAW 209
>AF321609-1|AAT09768.1| 834|Homo sapiens titin protein.
Length = 834
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -3
Query: 417 SPSLGVRRSLVLSPPGPKTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPP 238
+P V V PP K VP +P++++ L A P P S P+VP+ LPP
Sbjct: 455 APKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAAVPEKKLPEAIPPKPESPPPEVPEVLPP 514
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 417 SPSLGVRRSLVLSPPGPKTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPP 238
+P V V PP K VP +P++++ + A P P S P+VP+ LPP
Sbjct: 652 APKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEVPEVLPP 711
>AF174605-1|AAF04526.1| 272|Homo sapiens F-box protein Fbx25
protein.
Length = 272
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -1
Query: 476 HPRSATDLSI*VNSGLCILVRPV*ASAVV-----WCCRLQVLKLW 357
+PR DL ++S LCIL+R V S +V W CRL+ + W
Sbjct: 79 NPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAW 123
>AB070270-1|BAB85128.1| 358|Homo sapiens F-box domain
Fbx25-containing protein protein.
Length = 358
Score = 32.3 bits (70), Expect = 2.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -1
Query: 476 HPRSATDLSI*VNSGLCILVRPV*ASAVV-----WCCRLQVLKLW 357
+PR DL ++S LCIL+R V S +V W CRL+ + W
Sbjct: 165 NPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWICRLETILAW 209
>AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 31.1 bits (67), Expect = 5.4
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = -3
Query: 429 VHSCSPSLGVRRSLVLSPPGPKTLVP*A*P----VSLPRSSLKISLL*PAFPKSPSSF-- 268
V CS + S V PP P+ L+P P +S PR +L P P SP S
Sbjct: 960 VTDCSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRPALS-----PILPDSPVSLPL 1014
Query: 267 -CPKVPKTLPPP 235
P +P + PPP
Sbjct: 1015 PPPLLPSSEPPP 1026
>AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 31.1 bits (67), Expect = 5.4
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = -3
Query: 429 VHSCSPSLGVRRSLVLSPPGPKTLVP*A*P----VSLPRSSLKISLL*PAFPKSPSSF-- 268
V CS + S V PP P+ L+P P +S PR +L P P SP S
Sbjct: 960 VTDCSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRPALS-----PILPDSPVSLPL 1014
Query: 267 -CPKVPKTLPPP 235
P +P + PPP
Sbjct: 1015 PPPLLPSSEPPP 1026
>AJ277892-6|CAD12460.1| 454|Homo sapiens Titin fetal Isoform
protein.
Length = 454
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 417 SPSLGVRRSLVLSPPGPKTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPP 238
+P V V PP K VP +P++++ + A P P S P+VP+ LPP
Sbjct: 289 APKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEVPEVLPP 348
>AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein.
Length = 836
Score = 31.1 bits (67), Expect = 5.4
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = -3
Query: 429 VHSCSPSLGVRRSLVLSPPGPKTLVP*A*P----VSLPRSSLKISLL*PAFPKSPSSF-- 268
V CS + S V PP P+ L+P P +S PR +L P P SP S
Sbjct: 186 VTDCSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRPALS-----PILPDSPVSLPL 240
Query: 267 -CPKVPKTLPPP 235
P +P + PPP
Sbjct: 241 PPPLLPSSEPPP 252
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 242 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 207 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 296
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,476,925
Number of Sequences: 237096
Number of extensions: 2787326
Number of successful extensions: 6182
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6133
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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