Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G10
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d...    32   0.45 
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase...    32   0.45 
AL110484-10|CAB54401.1|  237|Caenorhabditis elegans Hypothetical...    29   5.6  
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali...    29   5.6  
Z66519-5|CAA91382.2|  500|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical ...    28   9.8  

>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
           protein 1 protein.
          Length = 1427

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = -1

Query: 704 LRNFDLDKQSIITYMNXKKT--NYWQRLLLSVEVITNHG--GSLLKTDVWSFVTELLGDH 537
           L  F +   S++T +  +K     W +++L + +  NH      L+   +SFV EL G H
Sbjct: 337 LPRFPMMPDSMVTNLEHRKELLENWLQMVLHIPINRNHHETAEFLEVSRYSFVNELGGKH 396

Query: 536 TTG 528
           T G
Sbjct: 397 TEG 399


>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
           protein.
          Length = 1427

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = -1

Query: 704 LRNFDLDKQSIITYMNXKKT--NYWQRLLLSVEVITNHG--GSLLKTDVWSFVTELLGDH 537
           L  F +   S++T +  +K     W +++L + +  NH      L+   +SFV EL G H
Sbjct: 337 LPRFPMMPDSMVTNLEHRKELLENWLQMVLHIPINRNHHETAEFLEVSRYSFVNELGGKH 396

Query: 536 TTG 528
           T G
Sbjct: 397 TEG 399


>AL110484-10|CAB54401.1|  237|Caenorhabditis elegans Hypothetical
           protein Y38E10A.10 protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/80 (27%), Positives = 31/80 (38%)
 Frame = +2

Query: 38  DFDIRS*GAKLDTTQNEYKSVLYLRYNSGCVLTQKFTDLLITRKITRSAGNPQGRHPRDV 217
           D+D+   G  L +    Y SV      SG  +   FT  L       +      R  +D+
Sbjct: 110 DYDVDL-GDSLTSIVETYVSVAGANRGSGFCVAPTFTSFLAPTCNRVNGLWCASRFIKDI 168

Query: 218 TWDKQMGGGKVFGTLGQNDD 277
             +    G KVF   G+NDD
Sbjct: 169 NEETHYEGSKVFSIYGRNDD 188


>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
           pathway homologprotein 1 protein.
          Length = 1451

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = +2

Query: 146 TDLLITRKITRSAGNPQGRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAG--YNREIFN 319
           T+ ++ +  T  AG  Q RH +        G  +V       + GL    G  Y++++  
Sbjct: 88  TNGMVIQAKTPGAGVIQARHMQSQQSFPSGGPARVLMNRSSTNAGLSRMVGGGYDQQLPT 147

Query: 320 DDRGKLTGQAYGTRVLGPGGDSTKLRRTPR 409
              G+L   +   RV G G  S +L+ TP+
Sbjct: 148 APNGRLMIPSTAVRVPGSGMASPRLQTTPQ 177


>Z66519-5|CAA91382.2|  500|Caenorhabditis elegans Hypothetical
           protein B0334.5 protein.
          Length = 500

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -2

Query: 280 SIIVLSQSAKDLASPHLFVPSDVTRVSPLRIAR*SSNLPRNQKVRKLLR*HTPRV 116
           S+I L      LA+P LF+  D  +V+P  I R S+ L     +R+  + + PR+
Sbjct: 52  SLIALIYGTSFLANPFLFIKKD--QVTPRPIMRRSTQLSIIHHIRQPCQSNVPRI 104


>AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical
           protein T20B6.3 protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +2

Query: 236 GGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGG 379
           GGG   G  G   DG +G  G+         G + G  YG   +G GG
Sbjct: 167 GGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGG 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,840,054
Number of Sequences: 27780
Number of extensions: 409881
Number of successful extensions: 1050
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)