BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G10 (857 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 33 0.24 At3g24540.1 68416.m03082 protein kinase family protein contains ... 31 0.74 At3g50580.1 68416.m05532 proline-rich family protein contains pr... 31 1.3 At5g45113.1 68418.m05537 mitochondrial transcription termination... 29 4.0 At2g16630.1 68415.m01909 proline-rich family protein contains pr... 29 4.0 At3g46630.1 68416.m05062 expressed protein contains similarity t... 28 6.9 At1g63700.1 68414.m07209 protein kinase, putative contains prote... 28 6.9 At5g26080.1 68418.m03103 proline-rich family protein contains pr... 28 9.1 At5g01790.1 68418.m00098 expressed protein 28 9.1 At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 28 9.1 >At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor family protein low similarity to extensin [Volvox carteri] GI:21992 Length = 312 Score = 33.1 bits (72), Expect = 0.24 Identities = 29/73 (39%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -3 Query: 423 SCSPSLGVRRSLVLSPPGPKTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPK--VPK 250 S SPS SL S P P +L P + P P SS +S L P+ SP S P P Sbjct: 42 SSSPSSAPPSSLSPSSPPPLSLSP-SSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAPPS 100 Query: 249 TL----PPPICLS 223 +L PPP+ LS Sbjct: 101 SLSPSSPPPLSLS 113 >At3g24540.1 68416.m03082 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 509 Score = 31.5 bits (68), Expect = 0.74 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Frame = -3 Query: 402 VRRSLVLSPPGPKTLVP*---A*PVSLPRSSLKISLL*PAFPKSPSSFC-PKVPKTLPPP 235 + S SPP P+ VP + P P++ + +SL P P+SPS+ P++ PPP Sbjct: 34 ITMSSASSPPPPQVFVPEPLFSEPPPPPKAPVNVSLSPPPPPRSPSTSTPPRLGNRNPPP 93 >At3g50580.1 68416.m05532 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 265 Score = 30.7 bits (66), Expect = 1.3 Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Frame = -3 Query: 381 SPPGPKTLVP*A*PVSLPRSSLKISLL*PAFPKSPS--SFCPKVPKTLPPP 235 SPP VP P P SL PA KSPS S P PK PPP Sbjct: 109 SPPSLTPFVPHPTPKKSPSPPPTPSLPPPAPKKSPSTPSLPPPTPKKSPPP 159 >At5g45113.1 68418.m05537 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF Length = 414 Score = 29.1 bits (62), Expect = 4.0 Identities = 17/71 (23%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = -1 Query: 704 LRNFDLDKQSIITYMNXKKTNYWQRLLLSVEVITNHGGSLLK-TDVWSFVTELLGDHTTG 528 L+ +L + Y++ +KT W+R+L ++E++ G K +++ +L+G+ T+G Sbjct: 79 LKGLNLGCDWLARYLSVRKTYNWRRILETMELLEKVGFKEKKLSNLLKAYPDLVGE-TSG 137 Query: 527 RKVGVLIQIPH 495 K ++ + H Sbjct: 138 NKAYIMFEKFH 148 >At2g16630.1 68415.m01909 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 359 Score = 29.1 bits (62), Expect = 4.0 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%) Frame = -3 Query: 294 AFPKSPSSFCPKVP--KTLPPP 235 A P PSSFCPK P +PPP Sbjct: 139 AQPVQPSSFCPKPPTAPVMPPP 160 >At3g46630.1 68416.m05062 expressed protein contains similarity to defective chloroplasts and leaves protein SP:Q42463 from [Lycopersicon esculentum] Length = 207 Score = 28.3 bits (60), Expect = 6.9 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -3 Query: 642 LLAKIIVKC*GDHQSWRISAEDRRLVFCDRTPWRPYHRQKSGC 514 LLAK I+ R+ ED ++V P+ PY + K GC Sbjct: 103 LLAKEILHSDRYLDGERLDFEDEKIVMEKLLPYHPYSKDKIGC 145 >At1g63700.1 68414.m07209 protein kinase, putative contains protein kinase domain, Pfam:PF00069; similar to MEK kinase (MAP3Ka) [Arabidopsis thaliana] gi|4204912|gb|AAD10848 Length = 883 Score = 28.3 bits (60), Expect = 6.9 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 662 MNXKKTNYWQRLLLSVEVITNHGGSLLKTDVWSFVTELLGDHTT 531 ++ K + YW ++ EVI N GS L D+WS +L TT Sbjct: 557 LSFKGSPYW----MAPEVIKNSNGSNLAVDIWSLGCTVLEMATT 596 >At5g26080.1 68418.m03103 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 141 Score = 27.9 bits (59), Expect = 9.1 Identities = 18/52 (34%), Positives = 21/52 (40%) Frame = -3 Query: 387 VLSPPGPKTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPPPI 232 + SPP P P P P S + AFP P + P P PPPI Sbjct: 39 IYSPPPPPYRSPVTIPPPPPVYSRPV-----AFPPPPPIYSPPPPPIYPPPI 85 >At5g01790.1 68418.m00098 expressed protein Length = 188 Score = 27.9 bits (59), Expect = 9.1 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -3 Query: 297 PAFPKSPSSFCPKVPKTLPPP 235 P PK PSS P +P PPP Sbjct: 63 PGTPKHPSSELPTLPPLTPPP 83 >At4g18670.1 68417.m02762 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 839 Score = 27.9 bits (59), Expect = 9.1 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = -3 Query: 417 SPSLGVRRSLVLSPPGPKTLVP*A*PVSLPRSSLKISLL*PAF--PKSPSSFCPKVPKTL 244 SPS S + SPP P T P+S ++S I + P F P PSS P +P + Sbjct: 548 SPSSPTPSSPIPSPPTPSTPPT---PISPGQNSPPI-IPSPPFTGPSPPSSPSPPLPPVI 603 Query: 243 P-PPI 232 P PPI Sbjct: 604 PSPPI 608 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,975,714 Number of Sequences: 28952 Number of extensions: 393378 Number of successful extensions: 1026 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 960 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1022 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1999652000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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