Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G09
         (878 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7SDQ3 Cluster: Putative uncharacterized protein NCU028...    35   2.4  
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma...    35   3.1  
UniRef50_Q478B4 Cluster: Glycosyl hydrolase, BNR repeat precurso...    34   5.5  
UniRef50_Q1DQ34 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q5YPH6 Cluster: Putative non-ribosomal peptide syntheta...    33   9.6  

>UniRef50_Q7SDQ3 Cluster: Putative uncharacterized protein
           NCU02853.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU02853.1 - Neurospora crassa
          Length = 993

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = -1

Query: 245 RSHARQDQD*RPNLLRHQRFHSRVRAHAHVRLDQHQRQYPSRDEEGLHSCGHCEYEASNF 66
           R   RQ Q  + +  +HQ+ H +     H +  QHQ+Q+  +  + ++     +Y+   +
Sbjct: 213 RQQQRQQQQQQQHQQQHQQQHQQQHQQQHQQ--QHQQQHQQQQHQPIYLQQQHQYQHQQY 270

Query: 65  QHHVQXTQ 42
            HH Q  Q
Sbjct: 271 HHHQQQQQ 278


>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
           Magnoliophyta|Rep: Putative reverse transcriptase -
           Zingiber officinale (Ginger)
          Length = 49

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 15/22 (68%), Positives = 15/22 (68%)
 Frame = +1

Query: 808 AXMNPPPPGXRRFAYWXPFRFL 873
           A MN P  G RRFAYW  FRFL
Sbjct: 26  ALMNRPTRGERRFAYWALFRFL 47


>UniRef50_Q478B4 Cluster: Glycosyl hydrolase, BNR repeat precursor;
           n=1; Dechloromonas aromatica RCB|Rep: Glycosyl
           hydrolase, BNR repeat precursor - Dechloromonas
           aromatica (strain RCB)
          Length = 402

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 20/56 (35%), Positives = 25/56 (44%)
 Frame = -1

Query: 257 CRCCRSHARQDQD*RPNLLRHQRFHSRVRAHAHVRLDQHQRQYPSRDEEGLHSCGH 90
           C CCR     D D  P +   Q F   VR  A  RLD+  R+  S D   + +C H
Sbjct: 217 CECCRLGLAADSDGTPVVFWRQIFGKNVRDFALARLDEPLRRV-SEDGWEIDACPH 271


>UniRef50_Q1DQ34 Cluster: Putative uncharacterized protein; n=1;
            Coccidioides immitis|Rep: Putative uncharacterized
            protein - Coccidioides immitis
          Length = 1307

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = -1

Query: 245  RSHARQDQD*RPNLLRHQRFHSRVRAHAHVRLDQHQRQYPSRDEEGLHSCGHCEYEASNF 66
            RS    D D + +   H      ++     +++QH++Q PS   + LH+    E++AS  
Sbjct: 1084 RSQHTNDTDAQSSDETHVSIPRALQRQQSPKVEQHEKQEPSSRPQSLHNSEELEHQASLS 1143

Query: 65   QHHV 54
            +H V
Sbjct: 1144 EHQV 1147


>UniRef50_Q5YPH6 Cluster: Putative non-ribosomal peptide synthetase;
            n=1; Nocardia farcinica|Rep: Putative non-ribosomal
            peptide synthetase - Nocardia farcinica
          Length = 5961

 Score = 33.1 bits (72), Expect = 9.6
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -2

Query: 349  LPIXVYTRSCTPLPALAPSRPSDFIYFISFSVDVVVAMPAKIKISA 212
            LP+       TP+P  A   P+    F+S   DV  A PA+I + A
Sbjct: 5471 LPVAALAPDLTPVPVRADELPTRLAEFVSRGFDVAAAPPARIALFA 5516


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,262,954
Number of Sequences: 1657284
Number of extensions: 9529456
Number of successful extensions: 19271
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19155
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)