Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G09
         (878 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44811| Best HMM Match : Toxin_33 (HMM E-Value=8.1)                  31   0.93 
SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)                    30   2.1  
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)                30   2.1  
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)                    28   8.7  
SB_9504| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.7  

>SB_44811| Best HMM Match : Toxin_33 (HMM E-Value=8.1)
          Length = 142

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +1

Query: 808 AXMNPPPPGXRRFAYW 855
           A MN P PG RRFAYW
Sbjct: 46  ALMNRPTPGERRFAYW 61


>SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)
          Length = 203

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +3

Query: 813 NESPTPRXKAVCXLGALPXP 872
           NES   R +AVC LGALP P
Sbjct: 102 NESANARGEAVCVLGALPLP 121


>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1081

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +3

Query: 813 NESPTPRXKAVCXLGALPXP 872
           NES   R +AVC LGALP P
Sbjct: 466 NESANARGEAVCVLGALPLP 485


>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
          Length = 238

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 194 QRFHSRVRAHAHVRLDQHQRQYPSRDEEGLHSCGHCEY 81
           ++FH    A+  +  D  ++ Y  R EEGL + GH ++
Sbjct: 65  EKFHDIGAAYEVLADDDQRKIYDQRGEEGLKNAGHRDH 102


>SB_9504| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 81

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +1

Query: 808 AXMNPPPPGXRRFAYW 855
           A MNP   G RRFAYW
Sbjct: 9   ALMNPTTHGERRFAYW 24


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,794,453
Number of Sequences: 59808
Number of extensions: 301374
Number of successful extensions: 1238
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2502612210
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)