Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G09
         (878 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114503-1|AAI14504.1|  472|Homo sapiens zinc finger, imprinted ...    30   9.6  
BC114446-1|AAI14447.1|  472|Homo sapiens zinc finger, imprinted ...    30   9.6  
AF365931-1|AAL11635.1|  472|Homo sapiens Kruppel-type zinc-finge...    30   9.6  

>BC114503-1|AAI14504.1|  472|Homo sapiens zinc finger, imprinted 3
           protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
 Frame = -1

Query: 266 QL*CRCCRSHARQDQD*RPNLLRHQ-----RFHSRVRAHAHV-RLDQHQRQYPSRDEEGL 105
           QL C  CR         + +L RH        HS  RA     +LD+HQ+ +        
Sbjct: 166 QLKCNACRKLFSSKSRLQSHLRRHACQKPFECHSCGRAFGEKWKLDKHQKTHAEERPYKC 225

Query: 104 HSCGHCEYEASN-FQHHVQXTQ 42
            +CG+   + SN FQH    T+
Sbjct: 226 ENCGNAYKQKSNLFQHQKMHTK 247


>BC114446-1|AAI14447.1|  472|Homo sapiens zinc finger, imprinted 3
           protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
 Frame = -1

Query: 266 QL*CRCCRSHARQDQD*RPNLLRHQ-----RFHSRVRAHAHV-RLDQHQRQYPSRDEEGL 105
           QL C  CR         + +L RH        HS  RA     +LD+HQ+ +        
Sbjct: 166 QLKCNACRKLFSSKSRLQSHLRRHACQKPFECHSCGRAFGEKWKLDKHQKTHAEERPYKC 225

Query: 104 HSCGHCEYEASN-FQHHVQXTQ 42
            +CG+   + SN FQH    T+
Sbjct: 226 ENCGNAYKQKSNLFQHQKMHTK 247


>AF365931-1|AAL11635.1|  472|Homo sapiens Kruppel-type zinc-finger
           protein ZIM3 protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
 Frame = -1

Query: 266 QL*CRCCRSHARQDQD*RPNLLRHQ-----RFHSRVRAHAHV-RLDQHQRQYPSRDEEGL 105
           QL C  CR         + +L RH        HS  RA     +LD+HQ+ +        
Sbjct: 166 QLKCNACRKLFSSKSRLQSHLRRHACQKPFECHSCGRAFGEKWKLDKHQKTHAEERPYKC 225

Query: 104 HSCGHCEYEASN-FQHHVQXTQ 42
            +CG+   + SN FQH    T+
Sbjct: 226 ENCGNAYKQKSNLFQHQKMHTK 247


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,402,256
Number of Sequences: 237096
Number of extensions: 1529390
Number of successful extensions: 3606
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3563
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)