BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G09 (878 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC114503-1|AAI14504.1| 472|Homo sapiens zinc finger, imprinted ... 30 9.6 BC114446-1|AAI14447.1| 472|Homo sapiens zinc finger, imprinted ... 30 9.6 AF365931-1|AAL11635.1| 472|Homo sapiens Kruppel-type zinc-finge... 30 9.6 >BC114503-1|AAI14504.1| 472|Homo sapiens zinc finger, imprinted 3 protein. Length = 472 Score = 30.3 bits (65), Expect = 9.6 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 7/82 (8%) Frame = -1 Query: 266 QL*CRCCRSHARQDQD*RPNLLRHQ-----RFHSRVRAHAHV-RLDQHQRQYPSRDEEGL 105 QL C CR + +L RH HS RA +LD+HQ+ + Sbjct: 166 QLKCNACRKLFSSKSRLQSHLRRHACQKPFECHSCGRAFGEKWKLDKHQKTHAEERPYKC 225 Query: 104 HSCGHCEYEASN-FQHHVQXTQ 42 +CG+ + SN FQH T+ Sbjct: 226 ENCGNAYKQKSNLFQHQKMHTK 247 >BC114446-1|AAI14447.1| 472|Homo sapiens zinc finger, imprinted 3 protein. Length = 472 Score = 30.3 bits (65), Expect = 9.6 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 7/82 (8%) Frame = -1 Query: 266 QL*CRCCRSHARQDQD*RPNLLRHQ-----RFHSRVRAHAHV-RLDQHQRQYPSRDEEGL 105 QL C CR + +L RH HS RA +LD+HQ+ + Sbjct: 166 QLKCNACRKLFSSKSRLQSHLRRHACQKPFECHSCGRAFGEKWKLDKHQKTHAEERPYKC 225 Query: 104 HSCGHCEYEASN-FQHHVQXTQ 42 +CG+ + SN FQH T+ Sbjct: 226 ENCGNAYKQKSNLFQHQKMHTK 247 >AF365931-1|AAL11635.1| 472|Homo sapiens Kruppel-type zinc-finger protein ZIM3 protein. Length = 472 Score = 30.3 bits (65), Expect = 9.6 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 7/82 (8%) Frame = -1 Query: 266 QL*CRCCRSHARQDQD*RPNLLRHQ-----RFHSRVRAHAHV-RLDQHQRQYPSRDEEGL 105 QL C CR + +L RH HS RA +LD+HQ+ + Sbjct: 166 QLKCNACRKLFSSKSRLQSHLRRHACQKPFECHSCGRAFGEKWKLDKHQKTHAEERPYKC 225 Query: 104 HSCGHCEYEASN-FQHHVQXTQ 42 +CG+ + SN FQH T+ Sbjct: 226 ENCGNAYKQKSNLFQHQKMHTK 247 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 95,402,256 Number of Sequences: 237096 Number of extensions: 1529390 Number of successful extensions: 3606 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2904 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3563 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 11215125244 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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