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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G08
         (795 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)                 33   0.27 
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)                   32   0.47 
SB_812| Best HMM Match : FH2 (HMM E-Value=0)                           32   0.47 
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)               31   1.1  
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)                      31   1.1  
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.4  
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.5  
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)                 29   5.7  
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  
SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  
SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)              28   7.6  
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)                   28   7.6  

>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
          Length = 768

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
           PPPP       PPPPPP           PP  GG
Sbjct: 665 PPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGG 698



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXF 560
           PPPP       PPPPPP F
Sbjct: 689 PPPPPPIGGGAPPPPPPGF 707



 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
           PPPP        PPPPP           PP  GG
Sbjct: 664 PPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGG 697


>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
          Length = 739

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXF 560
           PPPP  F    PPPPPP F
Sbjct: 200 PPPPPGFPGGAPPPPPPPF 218


>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
          Length = 1430

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
           PPPP    F  PPPPPP           PP
Sbjct: 654 PPPPGGGMFPPPPPPPPGGGVPGPPKPPPP 683



 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -3

Query: 628 FFXXPPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
           F   PPPP       PPPPPP           PP
Sbjct: 649 FGGIPPPPPGGGMFPPPPPPPPGGGVPGPPKPPP 682


>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
          Length = 341

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/36 (38%), Positives = 14/36 (38%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGGXG 509
           PPPP       PPPPPP           PP   G G
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDG 328


>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
          Length = 330

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 625 FXXPPPPXXFFFXXPPPPPPXF 560
           F  PPPP       PPPPPP F
Sbjct: 309 FAPPPPPPEPTSELPPPPPPPF 330



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 625 FXXPPPPXXFFFXXPPPPPP 566
           F  PPPP   F   PPPP P
Sbjct: 299 FQPPPPPPTDFAPPPPPPEP 318



 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -3

Query: 628 FFXXPPPPXXFFFXXPPPPPP 566
           F   PPPP       PPPPPP
Sbjct: 309 FAPPPPPPEPTSELPPPPPPP 329


>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 476

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 625 FXXPPPPXXFFFXXPPPPPP 566
           +  PPPP    F  PPPPPP
Sbjct: 423 YIPPPPPGFPQFQPPPPPPP 442


>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 831

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
           PPPP  +    PPPPPP           PP
Sbjct: 53  PPPPRFYDNDIPPPPPPRRGFYDDYPPPPP 82



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
           PPPP  F+    PPPPP           PP
Sbjct: 52  PPPPPRFYDNDIPPPPPPRRGFYDDYPPPP 81



 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPP   F+   PPPPPP
Sbjct: 67  PPPRRGFYDDYPPPPPP 83


>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
          Length = 305

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGGXG 509
           PPPP       PPPPPP           PP     G
Sbjct: 127 PPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATG 162



 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
           PPPP       PPPPPP           PP
Sbjct: 140 PPPPIAPATGGPPPPPPIAPATGGPPPPPP 169


>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2143

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 86  PPPPPASNVPAPPPPPP 102


>SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 201

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 93  PPPPPQLENDFPPPPPP 109


>SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)
          Length = 479

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 425 PPPPPPAPLPPPPPPPP 441


>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 440

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 304 PPPPLPAGVPAPPPPPP 320


>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 421

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 199 PPPPLDDLDDLPPPPPP 215


>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
          Length = 514

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 315 PPPPPARMGTAPPPPPP 331


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,493,186
Number of Sequences: 59808
Number of extensions: 151008
Number of successful extensions: 1057
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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