Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G08
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.2
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 2.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 2.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.1
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 6.7
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 6.7
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 6.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 8.9
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGGXG 509
PPPP + PPPPPP P G G
Sbjct: 43 PPPPCGGGYEAPPPPPPPSYAGGPSYAGPSYAGSYG 78
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP F PPPPPP
Sbjct: 773 PPPPPGGFKGGPPPPPP 789
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP F PPPPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXG 518
PPPP PPPPPP PP G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP F PPPPPP
Sbjct: 773 PPPPPGGFKGGPPPPPP 789
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP F PPPPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXG 518
PPPP PPPPPP PP G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP F PPPPPP
Sbjct: 356 PPPPPGGFKGGPPPPPP 372
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP F PPPPPP
Sbjct: 357 PPPPGGFKGGPPPPPPP 373
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXG 518
PPPP PPPPPP PP G
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 288 PPPPSSGMWPPPPPPPP 304
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPP 303
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPP + PPPPPP + PP
Sbjct: 337 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 366
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 298 PPPPSSGMWPPPPPPPP 314
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPP 313
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPP + PPPPPP + PP
Sbjct: 347 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 376
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPP 569
PPPP ++ PPPPP
Sbjct: 95 PPPPPPHYYTQPPPPP 110
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 579 PPPPPPMLGGPPPPPPP 595
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 578 PPPPPPPMLGGPPPPPP 594
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
PPP PPPPPP PP GG
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 613 PPPXXFFFXXPPPPPP 566
PPP F PPPPPP
Sbjct: 105 PPPPPMFGAPPPPPPP 120
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPP 569
PPPP F PPPPP
Sbjct: 84 PPPPPMFAGGIPPPPP 99
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPP 569
PPPP F PPPPP
Sbjct: 105 PPPPPMFGAPPPPPPP 120
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
PPPP PPPPPP PP GG
Sbjct: 289 PPPPRA---GSPPPPPPPRGSPPTGSLPPPQAGG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
PPPP PPPPPP PP GG
Sbjct: 310 PPPPRA---GSPPPPPPPRGSPPTGSLPPPQAGG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
PPPP PPPPPP PP GG
Sbjct: 295 PPPPRA---GSPPPPPPPRGSPPTGSLPPPQAGG 325
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 540 PPPPVGMANGGPPPPPP 556
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 1345 PPPPSDDLTPVPPPPPP 1361
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXF 560
P PP + PPPPPP F
Sbjct: 56 PRPPIGYGAPPPPPPPPAF 74
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXF 560
P PP + PPPPPP F
Sbjct: 56 PRPPIGYGAPPPPPPPPAF 74
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXF 560
P PP + PPPPPP F
Sbjct: 56 PRPPIGYGAPPPPPPPPAF 74
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 457 PPSPXXKKXXXGGXFSXPPXPPXRXEXXP 543
PP P +K GG S PP PP R P
Sbjct: 123 PPPPPPRKSRAGGS-SPPPPPPPRVPRTP 150
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 41 PPPPPMCGCAPPPPPPP 57
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 42 PPPPMCGCAPPPPPPPP 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,833,027
Number of Sequences: 27780
Number of extensions: 147162
Number of successful extensions: 1279
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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