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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G08
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical pr...    31   1.3  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    31   1.3  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    31   1.3  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    31   1.3  
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    30   2.2  
AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical ...    30   2.2  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    29   3.8  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    29   3.8  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    29   3.8  
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    29   5.1  
U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U58748-7|AAM97987.1|  399|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (gr...    28   8.9  

>Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical
           protein ZC168.5 protein.
          Length = 172

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGGXG 509
           PPPP    +  PPPPPP           P   G  G
Sbjct: 43  PPPPCGGGYEAPPPPPPPSYAGGPSYAGPSYAGSYG 78


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP   F   PPPPPP
Sbjct: 773 PPPPPGGFKGGPPPPPP 789



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP  F    PPPPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXG 518
           PPPP       PPPPPP           PP  G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP   F   PPPPPP
Sbjct: 773 PPPPPGGFKGGPPPPPP 789



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP  F    PPPPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXG 518
           PPPP       PPPPPP           PP  G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP   F   PPPPPP
Sbjct: 356 PPPPPGGFKGGPPPPPP 372



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP  F    PPPPPP
Sbjct: 357 PPPPGGFKGGPPPPPPP 373



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXG 518
           PPPP       PPPPPP           PP  G
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP    +  PPPPPP
Sbjct: 288 PPPPSSGMWPPPPPPPP 304



 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPP 303



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
           PPP   +    PPPPPP +         PP
Sbjct: 337 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 366


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP    +  PPPPPP
Sbjct: 298 PPPPSSGMWPPPPPPPP 314



 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPP 313



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
           PPP   +    PPPPPP +         PP
Sbjct: 347 PPPGMRYPGGMPPPPPPRYPSAGPGMYPPP 376


>AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical
           protein Y40B1A.5 protein.
          Length = 134

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPP 569
           PPPP   ++  PPPPP
Sbjct: 95  PPPPPPHYYTQPPPPP 110


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 579 PPPPPPMLGGPPPPPPP 595



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 578 PPPPPPPMLGGPPPPPP 594



 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
           PPP        PPPPPP           PP  GG
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 613 PPPXXFFFXXPPPPPP 566
           PPP   F   PPPPPP
Sbjct: 105 PPPPPMFGAPPPPPPP 120



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPP 569
           PPPP  F    PPPPP
Sbjct: 84  PPPPPMFAGGIPPPPP 99



 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPP 569
           PPPP  F    PPPPP
Sbjct: 105 PPPPPMFGAPPPPPPP 120


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
           PPPP       PPPPPP           PP  GG
Sbjct: 289 PPPPRA---GSPPPPPPPRGSPPTGSLPPPQAGG 319


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
           PPPP       PPPPPP           PP  GG
Sbjct: 310 PPPPRA---GSPPPPPPPRGSPPTGSLPPPQAGG 340


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGG 515
           PPPP       PPPPPP           PP  GG
Sbjct: 295 PPPPRA---GSPPPPPPPRGSPPTGSLPPPQAGG 325


>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 540 PPPPVGMANGGPPPPPP 556


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616  PPPPXXFFFXXPPPPPP 566
            PPPP       PPPPPP
Sbjct: 1345 PPPPSDDLTPVPPPPPP 1361


>U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical
           protein ZK180.5a protein.
          Length = 542

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXF 560
           P PP  +    PPPPPP F
Sbjct: 56  PRPPIGYGAPPPPPPPPAF 74


>U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK180.5b protein.
          Length = 497

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXF 560
           P PP  +    PPPPPP F
Sbjct: 56  PRPPIGYGAPPPPPPPPAF 74


>U58748-7|AAM97987.1|  399|Caenorhabditis elegans Hypothetical
           protein ZK180.5c protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPPXF 560
           P PP  +    PPPPPP F
Sbjct: 56  PRPPIGYGAPPPPPPPPAF 74


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +1

Query: 457 PPSPXXKKXXXGGXFSXPPXPPXRXEXXP 543
           PP P  +K   GG  S PP PP R    P
Sbjct: 123 PPPPPPRKSRAGGS-SPPPPPPPRVPRTP 150


>U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (grd
           related) protein22 protein.
          Length = 162

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 41  PPPPPMCGCAPPPPPPP 57



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 616 PPPPXXFFFXXPPPPPP 566
           PPPP       PPPPPP
Sbjct: 42  PPPPMCGCAPPPPPPPP 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,833,027
Number of Sequences: 27780
Number of extensions: 147162
Number of successful extensions: 1279
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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