Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G08
(795 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g06140.1 68416.m00705 zinc finger (C3HC4-type RING finger) fa... 33 0.17
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 33 0.17
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 33 0.29
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 33 0.29
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 32 0.38
At1g67770.1 68414.m07733 RNA-binding protein, putative similar t... 32 0.38
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 31 0.67
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.88
At1g61080.1 68414.m06877 proline-rich family protein 31 1.2
At4g08370.1 68417.m01382 proline-rich extensin-like family prote... 30 1.5
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 30 2.0
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 30 2.0
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 30 2.0
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 30 2.0
At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family... 29 2.7
At3g50130.1 68416.m05480 expressed protein ; expression supporte... 29 2.7
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 29 3.6
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 29 3.6
At3g18810.1 68416.m02389 protein kinase family protein contains ... 29 3.6
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 29 3.6
At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associa... 29 4.7
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 29 4.7
At4g18570.1 68417.m02749 proline-rich family protein common fami... 28 6.2
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 28 6.2
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 23 6.5
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 8.2
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 28 8.2
At3g26120.1 68416.m03257 RNA-binding protein, putative similar t... 28 8.2
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 28 8.2
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 8.2
>At3g06140.1 68416.m00705 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 359
Score = 33.5 bits (73), Expect = 0.17
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 613 PPPXXFFFXXPPPPPPXF 560
PPP +++ PPPPPP F
Sbjct: 24 PPPPPYYYLDPPPPPPPF 41
Score = 33.1 bits (72), Expect = 0.22
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP ++ PPPPPP
Sbjct: 24 PPPPPYYYLDPPPPPPP 40
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 637 RXVFFXXPPPPXXFFFXXPPPPP 569
R + PPPP + PPPPP
Sbjct: 18 RHLHHYPPPPPYYYLDPPPPPPP 40
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP + PPPPPP + PP
Sbjct: 621 PPPPTYYAVQSPPPPPPVYYPPVTASPPPP 650
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP + PPPPPP PP
Sbjct: 607 PPPPTYYATQSPPPPPPPTYYAVQSPPPPP 636
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP ++ PPPPP PP
Sbjct: 620 PPPPPTYYAVQSPPPPPPVYYPPVTASPPP 649
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 32.7 bits (71), Expect = 0.29
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 631 VFFXXPPPPXXFFFXXPPPPP 569
V++ PPPP ++ PPPPP
Sbjct: 646 VYYSSPPPPPVYYSSPPPPPP 666
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 442 PPPPPPVYSPPPPPPPP 458
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 457 PPPPPPVYSPPPPPPPP 473
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 488 PPPPPPVYSPPPPPPPP 504
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 441 PPPPPPPVYSPPPPPPP 457
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 456 PPPPPPPVYSPPPPPPP 472
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 487 PPPPPPPVYSPPPPPPP 503
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP PPPPPP + PP
Sbjct: 431 PPPPVYSPPPPPPPPPPVYSPPPPPPPPPP 460
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 458 PPPPPVYSPPPPPPPPP 474
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 489 PPPPPVYSPPPPPPPPP 505
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPP---PPXFXXXXXXXXXPP 527
PPPP +++ PPPP PP PP
Sbjct: 552 PPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPP 584
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 618 PPPPPPCIEYSPPPPPP 634
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 625 FXXPPPPXXFFFXXPPPPP 569
+ PPPP + PPPPP
Sbjct: 627 YSPPPPPPVVHYSSPPPPP 645
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 631 VFFXXPPPPXXFFFXXPPPP 572
V++ PPPP + PPPP
Sbjct: 656 VYYSSPPPPPPVHYSSPPPP 675
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 631 VFFXXPPPPXXFFFXXPPPPPP 566
V+ PPPP PPPPPP
Sbjct: 435 VYSPPPPPPPPPPVYSPPPPPP 456
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 631 VFFXXPPPPXXFFFXXPPPP 572
V + PPPP ++ PPPP
Sbjct: 636 VHYSSPPPPPVYYSSPPPPP 655
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP + PPPP P PP
Sbjct: 581 PPPPIYPYLSPPPPPTPVSSPPPTPVYSPP 610
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 32.7 bits (71), Expect = 0.29
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + + PPPPPP
Sbjct: 402 PPPPPPYVYPSPPPPPP 418
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 415 PPPPSPPPYVYPPPPPP 431
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 32.3 bits (70), Expect = 0.38
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP ++F PPPPP
Sbjct: 95 PPPPRFYYFESTPPPPP 111
>At1g67770.1 68414.m07733 RNA-binding protein, putative similar to
terminal ear1 gb|AAC39463.1
Length = 527
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -3
Query: 616 PPPPXXF-FFXXPPPPPP 566
PPPP F +F PPPPPP
Sbjct: 51 PPPPLYFSYFSLPPPPPP 68
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 628 FFXXPPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
F PPPP PPPPPP + PP
Sbjct: 40 FLPHPPPPP------PPPPPPLYFSYFSLPPPPP 67
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGGXG 509
PPPP PPPPPP PP G G
Sbjct: 385 PPPPPPSAAAPPPPPPPKKGPAAPPPPPPPGKKGAG 420
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP PPPPPP PP
Sbjct: 384 PPPPPPPSAAAPPPPPPPKKGPAAPPPPPP 413
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.1 bits (67), Expect = 0.88
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP +++ P PPPP
Sbjct: 702 PPPPAPYYYSSPQPPPP 718
Score = 28.7 bits (61), Expect = 4.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 625 FXXPPPPXXFFFXXPPPPP 569
+ PP P +++ PPPPP
Sbjct: 777 YSPPPSPPVYYYNSPPPPP 795
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPP P
Sbjct: 758 PPPPPTVHYNPPPPPSP 774
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXG 518
PPPP PPPPPP PP G
Sbjct: 512 PPPPLPTTIAAPPPPPPPPRAAVAPPPPPPPPG 544
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXG 518
PPPP PPPPPP PP G
Sbjct: 525 PPPPPPRAAVAPPPPPPPPGTAAAPPPPPPPPG 557
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP PPPPPP PP
Sbjct: 540 PPPPGTAAAPPPPPPPPGTQAAPPPPPPPP 569
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP PPPPPP PP
Sbjct: 539 PPPPPGTAAAPPPPPPPPGTQAAPPPPPPP 568
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXGGXG 509
PPPP PPPPPP P G G
Sbjct: 553 PPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSG 588
>At4g08370.1 68417.m01382 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 350
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 637 RXVFFXXPPPPXXFFFXXPPPPP 569
R +F PPP + + PPPPP
Sbjct: 168 RVLFIYSSPPPPPYVYNSPPPPP 190
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 613 PPPXXFFFXXPPPPPP 566
PPP + + PPPPPP
Sbjct: 65 PPPPPYVYNSPPPPPP 80
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 628 FFXXPPPPXXFFFXXPPPPP 569
F PPP + + PPPPP
Sbjct: 101 FVYSSPPPPTYIYNSPPPPP 120
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 625 FXXPPPPXXFFFXXPPPPP 569
+ PPPP + PPPPP
Sbjct: 62 YSSPPPPPYVYNSPPPPPP 80
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP + PPPPPP PP
Sbjct: 195 PPPPYKYGRVYPPPPPPPQAARSYKRSPPP 224
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP PPPPPP PP
Sbjct: 32 PPPPPLMRRRAPPPPPPPLMRRRAPPPPPP 61
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP PPPPPP PP
Sbjct: 33 PPPPLMRRRAPPPPPPPLMRRRAPPPPPPP 62
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXF 560
PPPP PPPPPP F
Sbjct: 150 PPPPPPMPRRSPPPPPPRF 168
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPP 569
PPPP + + PPPPP
Sbjct: 169 PPPPPPYVYQSPPPPP 184
>At5g21280.1 68418.m02555 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 302
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 103 PPPPQPLNLFSPPPPPP 119
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PP P F PPPPPP
Sbjct: 105 PPQPLNLFSPPPPPPPP 121
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPP F PPPPPP
Sbjct: 104 PPPQPLNLFSPPPPPPP 120
>At3g50130.1 68416.m05480 expressed protein ; expression supported
by MPSS
Length = 564
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXF 560
PPPP F PPPPP F
Sbjct: 13 PPPPPSFRSIPRPPPPPSF 31
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPP-PPXFXXXXXXXXXPPXXGGXGXK 503
PPPP PPPP PP PP G G K
Sbjct: 55 PPPPSTPTTACPPPPSPPSSGGGSSYYYPPPSQSGGGSK 93
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP PPPPPP PP
Sbjct: 30 PPPPMRRRAPLPPPPPPPMRRRAPLPPPPP 59
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP PPPPPP PP
Sbjct: 44 PPPPMRRRAPLPPPPPPAMRRRVLPRPPPP 73
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 268 PPPPPGSWQPSPPPPPP 284
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 269 PPPPGSWQPSPPPPPPP 285
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP + PPPPPP
Sbjct: 35 PPPPSHQPYSYPPPPPP 51
>At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|P27048 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Mus musculus}
Length = 254
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPPXXG 518
PPPP P PPPP + PP G
Sbjct: 173 PPPPYGMRPPYPGPPPPQYGGQQRPMMIPPPGG 205
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPP 569
PPPP + PPPPP
Sbjct: 445 PPPPPSIHYSSPPPPP 460
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 324 PPPPPSVSKAPPPPPPP 340
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP PPPPPP
Sbjct: 325 PPPPSVSKAPPPPPPPP 341
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 631 VFFXXPPPPXXFFFXXPPPPP 569
V+ PPP + + PPPPP
Sbjct: 389 VYHSPPPPKEKYVYKSPPPPP 409
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 2/19 (10%)
Frame = -3
Query: 616 PPPPXXFFFXXP--PPPPP 566
PPPP P PPPPP
Sbjct: 604 PPPPSSRSIPSPSAPPPPP 622
Score = 23.0 bits (47), Expect(2) = 8.4
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 5/22 (22%)
Frame = -3
Query: 616 PPPPXX-----FFFXXPPPPPP 566
PPPP F PPPPPP
Sbjct: 488 PPPPLFTSTTSFSPSQPPPPPP 509
Score = 23.0 bits (47), Expect(2) = 8.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 583 PPPPPPXF 560
PPPPPP F
Sbjct: 507 PPPPPPLF 514
Score = 23.0 bits (47), Expect(2) = 6.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 583 PPPPPPXF 560
PPPPPP F
Sbjct: 621 PPPPPPSF 628
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP + PPPPPP PP
Sbjct: 550 PPPPPVY--SPPPPPPPVHSPPPPVFSPPP 577
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 631 VFFXXPPPPXXFFFXXPPPPP 569
V + PPPP + + PPPPP
Sbjct: 145 VIYNSPPPP--YIYSSPPPPP 163
>At3g26120.1 68416.m03257 RNA-binding protein, putative similar to
GB:AAC39463 from [Zea mays], PF00076 RNA recognition
motif (2 copies)
Length = 615
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 628 FFXXPPPPXXFFFXXPPPPPP 566
FF PP P F P PPPP
Sbjct: 62 FFNIPPHPMMFSPPPPQPPPP 82
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPP 566
PPPP F PPPPPP
Sbjct: 244 PPPPSGLF---PPPPPP 257
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 616 PPPPXXFFFXXPPPPPPXFXXXXXXXXXPP 527
PPPP + PPPPPP PP
Sbjct: 527 PPPPPPVY--SPPPPPPVHSPPPPVHSPPP 554
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,287,527
Number of Sequences: 28952
Number of extensions: 159396
Number of successful extensions: 2690
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2152
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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