BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G05 (893 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 31 1.2 07_03_0425 - 18070607-18070712,18071771-18072744 31 1.6 02_03_0016 + 13962086-13962326,13962529-13962614,13962652-139627... 31 1.6 04_01_0020 + 307110-307809,308412-308476,309245-309544 30 2.2 06_01_0730 + 5370575-5370761,5371395-5371438,5372057-5372204,537... 30 2.9 01_01_0942 + 7428384-7429536,7429623-7430335 29 5.0 01_01_0244 - 2005152-2005649,2006186-2006254 29 5.0 09_04_0581 - 18684273-18685814,18686156-18686200,18686393-18686683 29 6.6 07_03_0418 + 17979504-17980964 29 6.6 07_03_0415 + 17920383-17921843 29 6.6 >06_03_0243 + 18629793-18630047,18630362-18630442,18631911-18632305, 18632471-18632926,18633156-18633247,18633528-18633683, 18635657-18636057 Length = 611 Score = 31.1 bits (67), Expect = 1.2 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = -3 Query: 405 RPLVDSLGGNGVAHVTSWPAPSKASTIPLPREL 307 R +V LGG G + PAP+ AST PLP L Sbjct: 338 RAVVVLLGGRGPEPAAASPAPAAASTPPLPLSL 370 >07_03_0425 - 18070607-18070712,18071771-18072744 Length = 359 Score = 30.7 bits (66), Expect = 1.6 Identities = 17/38 (44%), Positives = 22/38 (57%) Frame = +2 Query: 254 SARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTW 367 +A A HVL VFP P++ H + LLGAG VT+ Sbjct: 4 AAAAAHVL-VFPFPAQGHINCMMHFATGLLGAGLHVTF 40 >02_03_0016 + 13962086-13962326,13962529-13962614,13962652-13962750, 13963022-13963131,13964024-13964083,13964220-13964304 Length = 226 Score = 30.7 bits (66), Expect = 1.6 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 Query: 595 GLRDDRVVFPADDRLLQRWYREGQXRDIGSEGPD 494 G + VV ADD + RWY +GQ D EG D Sbjct: 93 GAEAESVVVFADDAAVVRWYSDGQAVDPRYEGDD 126 >04_01_0020 + 307110-307809,308412-308476,309245-309544 Length = 354 Score = 30.3 bits (65), Expect = 2.2 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +2 Query: 251 TSARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVT 364 T RA ++ F +P ++ G++DAL G GH +T Sbjct: 13 TCIRALELIFTFVVPMTLKATIKLGLLDALTGGGHALT 50 >06_01_0730 + 5370575-5370761,5371395-5371438,5372057-5372204, 5372289-5372397,5373349-5373863,5374571-5374808, 5375296-5375560,5375740-5375844,5375950-5376015, 5376562-5377020,5377267-5377464,5378149-5378211 Length = 798 Score = 29.9 bits (64), Expect = 2.9 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Frame = +1 Query: 487 RVDQDLRCQYHXAVPLGTSAAAGDRQRE---IRRGRHGVLLQRCRGGLRGS----TSSAL 645 RV+ D R Y G +A + RE +R RHGV+ R G +GS S Sbjct: 104 RVENDQRRAYSHGQASGNTAESHGPNREFRVVRDSRHGVVENRPELGHKGSPNVKVSDRS 163 Query: 646 DPVVQRLHNAP 678 PVVQ N P Sbjct: 164 VPVVQTGRNHP 174 >01_01_0942 + 7428384-7429536,7429623-7430335 Length = 621 Score = 29.1 bits (62), Expect = 5.0 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -2 Query: 682 QVGHYGDAGQQDPGHLKYCPVARLGIVEEGLRDDRVVFPADDR 554 +VG GDAG D G +K + LG + E L + +F A R Sbjct: 208 EVGAGGDAGDDDGGRIKPQMLGYLGNLGEHLSNSLAIFAARGR 250 >01_01_0244 - 2005152-2005649,2006186-2006254 Length = 188 Score = 29.1 bits (62), Expect = 5.0 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -3 Query: 405 RPLVDSLGGNGVAHVTSWPAPSKASTIPLPREL 307 R +V LGG G + PAP+ AS PLP L Sbjct: 92 RAVVVLLGGRGPEPAAASPAPAAASAPPLPLSL 124 >09_04_0581 - 18684273-18685814,18686156-18686200,18686393-18686683 Length = 625 Score = 28.7 bits (61), Expect = 6.6 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 Query: 577 RGRHGVLLQRCRGGLRGSTSSALDPVVQRL 666 R H LLQR GG+ G S++ P + RL Sbjct: 38 RALHAALLQRGGGGVGGGASASRSPAIIRL 67 >07_03_0418 + 17979504-17980964 Length = 486 Score = 28.7 bits (61), Expect = 6.6 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +2 Query: 254 SARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTW 367 +A A HVL VFP P + H + L+GAG VT+ Sbjct: 4 AAAAAHVL-VFPAPGQGHINCMMHFATGLVGAGLHVTF 40 >07_03_0415 + 17920383-17921843 Length = 486 Score = 28.7 bits (61), Expect = 6.6 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +2 Query: 254 SARAYHVLCVFPIPSRSHNSLGKGIVDALLGAGHEVTW 367 +A A HVL VFP P + H + L+GAG VT+ Sbjct: 4 AAAAAHVL-VFPAPGQGHINCMMHFATGLVGAGLHVTF 40 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,398,877 Number of Sequences: 37544 Number of extensions: 446273 Number of successful extensions: 1291 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1253 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1291 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2518669100 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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