Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_G05
(893 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33) 33 0.24
SB_29034| Best HMM Match : Nucleoplasmin (HMM E-Value=2.2) 32 0.72
SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22) 31 0.95
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_40137| Best HMM Match : M-inducer_phosp (HMM E-Value=0.68) 29 3.8
SB_17746| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_58365| Best HMM Match : Lectin_C (HMM E-Value=1e-06) 29 6.7
SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_36460| Best HMM Match : Lectin_C (HMM E-Value=8e-05) 29 6.7
>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
Length = 997
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -3
Query: 345 PSKASTIPLPRELWLREGIGNTQSTWYARADVTTHTKKSSNWRHLMSEQFQ 193
P+ T P R LW EGI + + T+ A +T K+ S W++ Q Q
Sbjct: 217 PNAFVTKPACRALWDYEGINDQEMTFCRGAFITNVVKEDSGWKNFRRRQRQ 267
>SB_29034| Best HMM Match : Nucleoplasmin (HMM E-Value=2.2)
Length = 186
Score = 31.9 bits (69), Expect = 0.72
Identities = 18/82 (21%), Positives = 35/82 (42%)
Frame = +2
Query: 404 LKIIDVSATASVSEMIDMNDQRNADAGIALIRTFAANITXLSLSVPALQQAIVSGKYDAV 583
L I +A + ++ +++ NA +A +R + ++S+ LQ A + A
Sbjct: 26 LAIRSQAAGHDIKDVAALSNPPNAPVQLAFVRVYCGAQPTCTVSLATLQSAHIDYSTKAA 85
Query: 584 VTESFFNDAEAGYGAVLQVPWI 649
+ + GYG QV W+
Sbjct: 86 IIFRIAAKNDKGYGPATQVRWL 107
>SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 31.5 bits (68), Expect = 0.95
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 393 DSLGGNGVAH-VTSWPAPSKASTIPLPRELWLREGIGNTQSTWYARADVTTHTK 235
D L N + + V+S P P K + P+ LW G+ +Q RA+ TTH +
Sbjct: 115 DFLDLNSIENEVSSLPPPPKVISGGFPKYLWTPSGLSQSQVRSRNRANGTTHAR 168
>SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22)
Length = 192
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 345 PSKASTIPLPRELWLREGIGNTQSTWYARADVTTHTKKSSNWRHLMSEQ 199
P+ T P R LW EGI + + T+ A +T K+ S W L++ +
Sbjct: 122 PNAFVTKPACRALWDYEGINDQEMTFCRGAFITNVVKEDSGWYVLLTNR 170
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 380 PPKESTKGLKIIDVS--ATASVSEMIDMNDQRNADAGIALIRTFAANITXLSLSVPALQQ 553
PP S+ + ++ S ATA+ S ++ N +GI++ + + S +PA+
Sbjct: 1199 PPSSSSTTITTLNASVMATATPSASLEANASTMLSSGISVPSIDSTVLPDSSSYIPAVTT 1258
Query: 554 AIVSGKYDAVVTES 595
+ +G YD T S
Sbjct: 1259 VVQTGSYDMNRTSS 1272
>SB_40137| Best HMM Match : M-inducer_phosp (HMM E-Value=0.68)
Length = 458
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 682 QVGHYGDAGQQDPG-HLKYCPVARLGIVEE 596
+VG Y + ++P H+K PV R G+VEE
Sbjct: 410 EVGEYVEPESEEPARHIKETPVVRKGLVEE 439
>SB_17746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2
Query: 401 GLKIIDVSATASVSEMIDMNDQRNADAGIALIRTFAANITXLSLSVPALQQAIVSGKYDA 580
G+ I + TASVSE++ N Q++ D + L R+ ++I L +S I S +++
Sbjct: 312 GVSAIVSTVTASVSEILSKNVQKHTDI-VMLARSKLSSIDDL-ISKALTDNQISSDEFNL 369
Query: 581 VVTES 595
++ E+
Sbjct: 370 IIKEA 374
>SB_58365| Best HMM Match : Lectin_C (HMM E-Value=1e-06)
Length = 441
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 315 RELWLREGIGNTQSTWYARADVTTHTKKSSNWRHLMSEQFQCTIE 181
+ELW G +Q T Y+ A+V + +W L S C +E
Sbjct: 17 KELWTGILRGGSQDTTYSPANVGISMAATDSWLDLQSHNDTCYVE 61
>SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -2
Query: 682 QVGHYGDAGQQDPGHLKYCPVARLGIVEEGLRDDRVVFPADDRLLQRWYREGQXRDIGSE 503
Q+G YG+A + DP RL + EE + +P + L + RE + D+ E
Sbjct: 166 QLGKYGEAVENDP--------QRLAVFEENFERFGLPYPTEQDLEREARREQRLDDVSFE 217
Query: 502 GPDQRDTSISVSLV 461
G + TS +++
Sbjct: 218 GIARYITSGKCNII 231
>SB_36460| Best HMM Match : Lectin_C (HMM E-Value=8e-05)
Length = 452
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 315 RELWLREGIGNTQSTWYARADVTTHTKKSSNWRHLMSEQFQCTIE 181
+ELW G +Q T Y+ A+V + +W L S C +E
Sbjct: 38 KELWTGILRGGSQDTTYSPANVGISMAATDSWLDLQSHNDTCYVE 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,778,992
Number of Sequences: 59808
Number of extensions: 474638
Number of successful extensions: 1376
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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