BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_G05 (893 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U38945-1|AAB01737.1| 173|Homo sapiens CDKN2A protein. 31 4.3 U26727-1|AAA82236.1| 132|Homo sapiens p16INK4/MTS1 protein. 30 9.9 S78535-1|AAC60649.1| 179|Homo sapiens tumor supressor protein. 30 9.9 BT007020-1|AAP35666.1| 132|Homo sapiens cyclin-dependent kinase... 30 9.9 AL449423-3|CAH70601.1| 173|Homo sapiens cyclin-dependent kinase... 30 9.9 AF527803-1|AAM77919.1| 173|Homo sapiens cyclin-dependent kinase... 30 9.9 >U38945-1|AAB01737.1| 173|Homo sapiens CDKN2A protein. Length = 173 Score = 31.5 bits (68), Expect = 4.3 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = +1 Query: 529 PLGTSAAAGDRQREIRRGRHGVL--LQRCRGGLRGSTSSA 642 P G +AAA R ++RR RH L +RC GGL G A Sbjct: 113 PSGGAAAAPRRGAQLRRPRHSHLTRARRCPGGLPGHAGGA 152 >U26727-1|AAA82236.1| 132|Homo sapiens p16INK4/MTS1 protein. Length = 132 Score = 30.3 bits (65), Expect = 9.9 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 529 PLGTSAAAGDRQREIRRGRHG--VLLQRCRGGLRGSTSSA 642 P G +AAA R ++RR RH +RC GGL G A Sbjct: 72 PSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGA 111 >S78535-1|AAC60649.1| 179|Homo sapiens tumor supressor protein. Length = 179 Score = 30.3 bits (65), Expect = 9.9 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 529 PLGTSAAAGDRQREIRRGRHG--VLLQRCRGGLRGSTSSA 642 P G +AAA R ++RR RH +RC GGL G A Sbjct: 119 PSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGA 158 >BT007020-1|AAP35666.1| 132|Homo sapiens cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) protein. Length = 132 Score = 30.3 bits (65), Expect = 9.9 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 529 PLGTSAAAGDRQREIRRGRHG--VLLQRCRGGLRGSTSSA 642 P G +AAA R ++RR RH +RC GGL G A Sbjct: 72 PSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGA 111 >AL449423-3|CAH70601.1| 173|Homo sapiens cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) protein. Length = 173 Score = 30.3 bits (65), Expect = 9.9 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 529 PLGTSAAAGDRQREIRRGRHG--VLLQRCRGGLRGSTSSA 642 P G +AAA R ++RR RH +RC GGL G A Sbjct: 113 PSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGA 152 >AF527803-1|AAM77919.1| 173|Homo sapiens cyclin-dependent kinase inhibitor 2A, p14ARF protein. Length = 173 Score = 30.3 bits (65), Expect = 9.9 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 529 PLGTSAAAGDRQREIRRGRHG--VLLQRCRGGLRGSTSSA 642 P G +AAA R ++RR RH +RC GGL G A Sbjct: 113 PSGGAAAAPRRGAQLRRPRHSHPTRARRCPGGLPGHAGGA 152 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 110,874,457 Number of Sequences: 237096 Number of extensions: 2231627 Number of successful extensions: 8284 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 8010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8279 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 11492727354 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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