Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_G05
         (893 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.93 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   8.7  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          22   8.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.7  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 709 DPHXIDDGFQVGHYGDAG-QQDPGHLKYCPVARL 611
           DP  +  G    HYG AG QQD  + ++ P  R+
Sbjct: 53  DPSLLRQGVPGHHYGAAGSQQDMPYPRFPPYNRM 86


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 270 TCSACSRYLHAATTPS 317
           TC  CS  +H  T PS
Sbjct: 12  TCLICSPSVHCGTRPS 27


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 511 GSEGPDQRDTSISVSLVVH 455
           GS GP+  + S SVS  VH
Sbjct: 38  GSYGPEAGNVSCSVSWEVH 56


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = -2

Query: 508 SEGPDQRDTSISVSLVVHVNHFTYRSCGANI 416
           +E  +Q   ++  ++  +++HF   SC  N+
Sbjct: 556 NESEEQCPYTVDAAIYGNISHFINHSCDPNL 586


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,047
Number of Sequences: 438
Number of extensions: 4486
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)